fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G18400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm013222 not found in 321aa AT3G18400.1 1st_1st 0.556302521 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G18400.1     MEENLPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVDLNKCEPWDLPAKASMGEKE
gm013222_Glyma0 MEEKLPPGFRFHPTDEELITYYLLRKVSDISFTSKAVAVVDFNKSEPWDLPGKASMGEKE
                ***:****************:** ******.**.***. **:**.******.********

AT3G18400.1     WYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGVLVGMKKTLVFYKGRAPKGEK
gm013222_Glyma0 WYFFSLKDRKYPTGLRTNRATESGYWKTTGKDKEIFGGGVLIGMKKTLVFYMGRAPRGEK
                ***** :***************:************: .***:********* ****:***

AT3G18400.1     SNWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKKAQEQQPQSSQPSFGSPCDANSS
gm013222_Glyma0 SNWVMHEYRLENKQPY--SSKEEWVICRVFQKSSAPKKP--QQTSSSQPSQESPI----S
                ***********.***:  :.*****:****:**:*.**.  **..*****  **     *

AT3G18400.1     MANEFEDIDELPNLNS--NSSTIDYNNHIHQYSQRNVYSEDNTTSTAGLNMNMNM---AS
gm013222_Glyma0 MVNEFGDVD-LPNLNSIANSSS-SFTNNI-------AYNGDHPSNVNTNNMNLTMNWPSS
                *.*** *:* ******  ***: .:.*:*       .*. *:.:..   ***:.*   :*

AT3G18400.1     TNL---QSWTTSLLGPPLSPINSLLLKAFQIRNSYS------------FPKEMIPSFNHS
gm013222_Glyma0 TELVPSLPWPSGLLNPNLS-VNSLLLKALQLRNTYQQRETTTSTSDHHFATYVPQGFSHH
                *:*    .*.:.**.* ** :*******:*:**:*.            *.. :  .*.* 

AT3G18400.1     SLQQGVSNMIQNASSSSQVQ------PQPQEEAFNMDSIW
gm013222_Glyma0 NIGTDKHHFPPNLSASSSSKALESCVPQ-QEQPFNMDSIW
                .:  .  ::  * *:**. :      ** **:.*******
BoxShade v3.31 C (beta, 970507) Output
AT3G18400.1     M E E N L P P G F R F H P T D E E L I T H Y L C R K V S D I G F T G K A V V D V D L N K C E P W D L P A K A S M G E K E
gm013222_Glyma0    M E E K L P P G F R F H P T D E E L I T Y Y L L R K V S D I S F T S K A V A V V D F N K S E P W D L P G K A S M G E K E
 
AT3G18400.1     W Y F F S Q R D R K Y P T G L R T N R A T E A G Y W K T T G K D K E I Y R S G V L V G M K K T L V F Y K G R A P K G E K
gm013222_Glyma0    W Y F F S L K D R K Y P T G L R T N R A T E S G Y W K T T G K D K E I F G G G V L I G M K K T L V F Y M G R A P R G E K
 
AT3G18400.1     S N W V M H E Y R L E S K Q P F N P T N K E E W V V C R V F E K S T A A K K A Q E Q Q P Q S S Q P S F G S P C D A N S S
gm013222_Glyma0    S N W V M H E Y R L E N K Q P Y - - S S K E E W V I C R V F Q K S S A P K K P - - Q Q T S S S Q P S Q E S P I - - - - S
 
AT3G18400.1     M A N E F E D I D E L P N L N S - - N S S T I D Y N N H I H Q Y S Q R N V Y S E D N T T S T A G L N M N M N M - - - A S
gm013222_Glyma0    M V N E F G D V D - L P N L N S I A N S S S - S F T N N I - - - - - - - A Y N G D H P S N V N T N N M N L T M N W P S S
 
AT3G18400.1     T N L - - - Q S W T T S L L G P P L S P I N S L L L K A F Q I R N S Y S - - - - - - - - - - - - F P K E M I P S F N H S
gm013222_Glyma0    T E L V P S L P W P S G L L N P N L S - V N S L L L K A L Q L R N T Y Q Q R E T T T S T S D H H F A T Y V P Q G F S H H
 
AT3G18400.1     S L Q Q G V S N M I Q N A S S S S Q V Q - - - - - - P Q P Q E E A F N M D S I W
gm013222_Glyma0    N I G T D K H H F P P N L S A S S S S K A L E S C V P Q - Q E Q P F N M D S I W
 
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