fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G19184.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm008825 not found in 228aa AT5G42700.1 not_not 0.478048780 III
Pt016309 not found in 205aa AT5G42700.1 not_not 0.468292682 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G19184.1     MVESELSYEQIRLNRVEENKKRMGELNLNKLAQSLRVSSSSSSSSKPSPAKPRTMRIPVD
gm008825_Glyma0 MVAAI-AYEESRRKRVEENRKRMEALNLPLLSQALHKSPSPKSSPLKQ-VKNRT--IQKE
pt016309_POPTR_ MVAKISAYEESRRKRMEENKKRMEALNLHKLSRALKISTPTKSSPMKR-SKPRV--VEKQ
                **    :**: * :*:***:***  ***  *:::*: *....**.     * *.  :  :

AT3G19184.1     FSEVRRSSRAKG-PPPSYKEFGLEPLERRPRRS-----SRRRDLLNRVYASDDARMYAFD
gm008825_Glyma0 LVVVRRSSRVANLPTPVYKEVVVDRVTI-PRRTLGRPYNRHRDYANRVYASDEAREEALE
pt016309_POPTR_ VVVVRRSSRC---------DTVLLRIS------------KARDLSNRVYATDEARAKAME
                .  ******          :  :  :             : **  *****:*:**  *::

AT3G19184.1     RAEKLQSSLDSEYASFTKPMLQSHVTGGFWLGLPLPFCKAHMPKRDVIMTLVDEEEEESQ
gm008825_Glyma0 KAETLMSGLESEHPAFIKSMLQSHISGGFWLGLPVHFCKSNLPKGDEVMTLIDEDGNEYP
pt016309_POPTR_ KAEKLQSDLGSDYPIFIKSMLQSHVTGGFWLGLPVDFCRRNLPRRDDVITLIDEEADEYQ
                :**.* *.* *::. * *.*****::********: **: ::*: * ::**:**: :*  

AT3G19184.1     AKYLAQKNGLSGGWRGFAIDHQLVDGDAVVFHLIARTTFKVYIIRVNDDANNDSDGNEVN
gm008825_Glyma0 TIYLARKTGLSGGWKGFAVGHDLADGDAVIFQLIKHTAFKVYIIRANSPP----------
pt016309_POPTR_ VIYLARKNGLSGGWKGFAVAHGLLDGDAVVFQLIKPTACKVVVNMHQCY-----------
                . ***:*.******:***: * * *****:*:**  *: ** :   :             

AT3G19184.1     DDDSDGNEEDRDNDNESNEKQKETVSEGRQLRSSGKRKRRGRK
gm008825_Glyma0 --------EDK--------------------------------
pt016309_POPTR_ -------------------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT3G19184.1     M V E S E L S Y E Q I R L N R V E E N K K R M G E L N L N K L A Q S L R V S S S S S S S S K P S P A K P R T M R I P V D
gm008825_Glyma0    M V A A I - A Y E E S R R K R V E E N R K R M E A L N L P L L S Q A L H K S P S P K S S P L K Q - V K N R T - - I Q K E
pt016309_POPTR_    M V A K I S A Y E E S R R K R M E E N K K R M E A L N L H K L S R A L K I S T P T K S S P M K R - S K P R V - - V E K Q
 
AT3G19184.1     F S E V R R S S R A K G - P P P S Y K E F G L E P L E R R P R R S - - - - - S R R R D L L N R V Y A S D D A R M Y A F D
gm008825_Glyma0    L V V V R R S S R V A N L P T P V Y K E V V V D R V T I - P R R T L G R P Y N R H R D Y A N R V Y A S D E A R E E A L E
pt016309_POPTR_    V V V V R R S S R C - - - - - - - - - D T V L L R I S - - - - - - - - - - - - K A R D L S N R V Y A T D E A R A K A M E
 
AT3G19184.1     R A E K L Q S S L D S E Y A S F T K P M L Q S H V T G G F W L G L P L P F C K A H M P K R D V I M T L V D E E E E E S Q
gm008825_Glyma0    K A E T L M S G L E S E H P A F I K S M L Q S H I S G G F W L G L P V H F C K S N L P K G D E V M T L I D E D G N E Y P
pt016309_POPTR_    K A E K L Q S D L G S D Y P I F I K S M L Q S H V T G G F W L G L P V D F C R R N L P R R D D V I T L I D E E A D E Y Q
 
AT3G19184.1     A K Y L A Q K N G L S G G W R G F A I D H Q L V D G D A V V F H L I A R T T F K V Y I I R V N D D A N N D S D G N E V N
gm008825_Glyma0    T I Y L A R K T G L S G G W K G F A V G H D L A D G D A V I F Q L I K H T A F K V Y I I R A N S P P - - - - - - - - - -
pt016309_POPTR_    V I Y L A R K N G L S G G W K G F A V A H G L L D G D A V V F Q L I K P T A C K V V V N M H Q C Y - - - - - - - - - - -
 
AT3G19184.1     D D D S D G N E E D R D N D N E S N E K Q K E T V S E G R Q L R S S G K R K R R G R K
gm008825_Glyma0    - - - - - - - - E D K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt016309_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
0