fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G19184.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016309 not found in 205aa AT5G42700.1 not_not 0.468292682 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G19184.1     MVESELSYEQIRLNRVEENKKRMGELNLNKLAQSLRVSSSSSSSSKPSPAKPRTMRIPVD
pt016309_POPTR_ MVAKISAYEESRRKRMEENKKRMEALNLHKLSRALKISTPTKSSPMKR-SKPRVVEKQVV
                ** .  :**: * :*:*******  ***:**:::*::*:.:.**.    :***.:.  * 

AT3G19184.1     FSEVRRSSRAKGPPPSYKEFGLEPLERRPRRSSRRRDLLNRVYASDDARMYAFDRAEKLQ
pt016309_POPTR_ V--VRRSSRC---------------DTVLLRISKARDLSNRVYATDEARAKAMEKAEKLQ
                .  ******.               :    * *: *** *****:*:**  *:::*****

AT3G19184.1     SSLDSEYASFTKPMLQSHVTGGFWLGLPLPFCKAHMPKRDVIMTLVDEEEEESQAKYLAQ
pt016309_POPTR_ SDLGSDYPIFIKSMLQSHVTGGFWLGLPVDFCRRNLPRRDDVITLIDEEADEYQVIYLAR
                *.*.*:*. * *.***************: **: ::*:** ::**:*** :* *. ***:

AT3G19184.1     KNGLSGGWRGFAIDHQLVDGDAVVFHLIARTTFKVYIIRVNDDANNDSDGNEVNDDDSDG
pt016309_POPTR_ KNGLSGGWKGFAVAHGLLDGDAVVFQLIKPTACKVVV-----------------------
                ********:***: * *:*******:**  *: ** :                       

AT3G19184.1     NEEDRDNDNESNEKQKETVSEGRQLRSSGKRKRRGRK
pt016309_POPTR_ -----------NMHQCY--------------------
                           * :*
BoxShade v3.31 C (beta, 970507) Output
AT3G19184.1     M V E S E L S Y E Q I R L N R V E E N K K R M G E L N L N K L A Q S L R V S S S S S S S S K P S P A K P R T M R I P V D
pt016309_POPTR_    M V A K I S A Y E E S R R K R M E E N K K R M E A L N L H K L S R A L K I S T P T K S S P M K R - S K P R V V E K Q V V
 
AT3G19184.1     F S E V R R S S R A K G P P P S Y K E F G L E P L E R R P R R S S R R R D L L N R V Y A S D D A R M Y A F D R A E K L Q
pt016309_POPTR_    V - - V R R S S R C - - - - - - - - - - - - - - - D T V L L R I S K A R D L S N R V Y A T D E A R A K A M E K A E K L Q
 
AT3G19184.1     S S L D S E Y A S F T K P M L Q S H V T G G F W L G L P L P F C K A H M P K R D V I M T L V D E E E E E S Q A K Y L A Q
pt016309_POPTR_    S D L G S D Y P I F I K S M L Q S H V T G G F W L G L P V D F C R R N L P R R D D V I T L I D E E A D E Y Q V I Y L A R
 
AT3G19184.1     K N G L S G G W R G F A I D H Q L V D G D A V V F H L I A R T T F K V Y I I R V N D D A N N D S D G N E V N D D D S D G
pt016309_POPTR_    K N G L S G G W K G F A V A H G L L D G D A V V F Q L I K P T A C K V V V - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G19184.1     N E E D R D N D N E S N E K Q K E T V S E G R Q L R S S G K R K R R G R K
pt016309_POPTR_    - - - - - - - - - - - N M H Q C Y - - - - - - - - - - - - - - - - - - - -
 
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