fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G19184.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm008825 not found in 228aa AT5G42700.1 not_not 0.478048780 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G19184.1     MVESELSYEQIRLNRVEENKKRMGELNLNKLAQSLRVSSSSSSSSKPSPAKPRTMR-IPV
gm008825_Glyma0 MV-AAIAYEESRRKRVEENRKRMEALNLPLLSQALH----KSPSPKSSPLKQVKNRTIQK
                ** : ::**: * :*****:***  ***  *:*:*:    .*.*.*.** *  . * *  

AT3G19184.1     DFSEVRRSSR-AKGPPPSYKEFGLEPLERRPRRS-----SRRRDLLNRVYASDDARMYAF
gm008825_Glyma0 ELVVVRRSSRVANLPTPVYKEVVVDRVT-IPRRTLGRPYNRHRDYANRVYASDEAREEAL
                ::  ****** *: *.* ***. :: :   ***:     .*:**  *******:**  *:

AT3G19184.1     DRAEKLQSSLDSEYASFTKPMLQSHVTGGFWLGLPLPFCKAHMPKRDVIMTLVDEEEEES
gm008825_Glyma0 EKAETLMSGLESEHPAFIKSMLQSHISGGFWLGLPVHFCKSNLPKGDEVMTLIDEDGNEY
                ::**.* *.*:**:.:* *.*****::********: ***:::** * :***:**: :* 

AT3G19184.1     QAKYLAQKNGLSGGWRGFAIDHQLVDGDAVVFHLIARTTFKVYIIRVNDDANNDSDGNEV
gm008825_Glyma0 PTIYLARKTGLSGGWKGFAVGHDLADGDAVIFQLIKHTAFKVYIIRANSPP---------
                 : ***:*.******:***:.*:*.*****:*:** :*:*******.*. .         

AT3G19184.1     NDDDSDGNEEDRDNDNESNEKQKETVSEGRQLRSSGKRKRRGRK
gm008825_Glyma0 ---------EDK--------------------------------
                         **:
BoxShade v3.31 C (beta, 970507) Output
AT3G19184.1     M V E S E L S Y E Q I R L N R V E E N K K R M G E L N L N K L A Q S L R V S S S S S S S S K P S P A K P R T M R - I P V
gm008825_Glyma0    M V - A A I A Y E E S R R K R V E E N R K R M E A L N L P L L S Q A L H - - - - K S P S P K S S P L K Q V K N R T I Q K
 
AT3G19184.1     D F S E V R R S S R - A K G P P P S Y K E F G L E P L E R R P R R S - - - - - S R R R D L L N R V Y A S D D A R M Y A F
gm008825_Glyma0    E L V V V R R S S R V A N L P T P V Y K E V V V D R V T - I P R R T L G R P Y N R H R D Y A N R V Y A S D E A R E E A L
 
AT3G19184.1     D R A E K L Q S S L D S E Y A S F T K P M L Q S H V T G G F W L G L P L P F C K A H M P K R D V I M T L V D E E E E E S
gm008825_Glyma0    E K A E T L M S G L E S E H P A F I K S M L Q S H I S G G F W L G L P V H F C K S N L P K G D E V M T L I D E D G N E Y
 
AT3G19184.1     Q A K Y L A Q K N G L S G G W R G F A I D H Q L V D G D A V V F H L I A R T T F K V Y I I R V N D D A N N D S D G N E V
gm008825_Glyma0    P T I Y L A R K T G L S G G W K G F A V G H D L A D G D A V I F Q L I K H T A F K V Y I I R A N S P P - - - - - - - - -
 
AT3G19184.1     N D D D S D G N E E D R D N D N E S N E K Q K E T V S E G R Q L R S S G K R K R R G R K
gm008825_Glyma0    - - - - - - - - - E D K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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