fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G19290.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018930 not found in 414aa AT3G19290.1 1st_1st 0.486486486 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G19290.1     MGTHINFNNLGGGGHPGGEGSSNQMKPTGSVMPLARQSSVYSLTFDELQNTLGGP-GKDF
pt018930_POPTR_ MDSQWDYKNFGNA--PPGQSSVT--KPQENPF-LIRQSSVYSLTFDEFQNTWGGGLRKDF
                *.:: :::*:*..  * *:.* .  **  . : * ************:*** **   ***

AT3G19290.1     GSMNMDELLKSIWTAEEAQAMAMTSAPAATAVAQPGAGIPPPGGNLQRQGSLTLPRTISQ
pt018930_POPTR_ GSMNMEELLKNIWTAEETQAMTNT-----LGVGSEGSA---PGGNLQRQGSLTLPRTLSQ
                *****:****.******:***: *      .*.. *:.   ****************:**

AT3G19290.1     KTVDEVWKCLITK-DGNMEGSSGGGGESNVPPGRQQTLGEMTLEEFLFRAGVVREDNCVQ
pt018930_POPTR_ KTVDELWRDLIKETSGAAEDGSGSAG-SNLPQ-RQQTLGETTLEEFLVRAGVVREDT--Q
                *****:*: **.: .*  *..**..* **:*  ******* ******.********.  *

AT3G19290.1     QMGQVNGNNNNGFYG-----NSTAAGGLGFGFGQPNQNSITFNG--------TNDSMILN
pt018930_POPTR_ QIGR---PDNSGFFGELSLLNNNNDSSLAIGFQQPNGN----NGLMGTWRMENNGNLVAN
                *:*:    :*.**:*     *..  ..*.:** *** *    **        .*..:: *

AT3G19290.1     QPPGLGLKMGGTMQQQQ--QQQQLLQQQQQQMQQLNQPHPQQRLPQTIFPK-QANVAFSA
pt018930_POPTR_ QPPSLTLDAGGIRPTQQLPQSRQLSQQQ-----------------QLLFPKPAATVAFAS
                ***.* *. **    **  *.:** ***                 * :***  *.***::

AT3G19290.1     PVNITN----------KGFAGAANNSINNNNGLASYGGTGVTVAATSPGTSSAENNSLSP
pt018930_POPTR_ PLHLSNNAQLASPGVRRSVVGIADRSV--NNGLAHSGGMGIVSLAT--GGSNADTSSLSP
                *::::*          :...* *:.*:  *****  ** *:.  **  * *.*:..****

AT3G19290.1     VPYVLNRGRRSNTGLEKVIERRQRRMIKNRESAARSRARKQAYTLELEAEIEKLKKTNQE
pt018930_POPTR_ VPYVFSRGRKASTALEKVAERRQRRMIKNRESAARSRTLKQAHTQKLEDEVAKLKELNEV
                ****:.***::.*.**** ******************: ***:* :** *: ***: *: 

AT3G19290.1     LQKKQAEMVEMQKNELKETSKRPWGSKRQCLRRTLTGPW
pt018930_POPTR_ LQRKQAEIIEMQQNQFFETKKAQWGGKRQCLRRTLTGPW
                **:****::***:*:: **.*  **.*************
BoxShade v3.31 C (beta, 970507) Output
AT3G19290.1     M G T H I N F N N L G G G G H P G G E G S S N Q M K P T G S V M P L A R Q S S V Y S L T F D E L Q N T L G G P - G K D F
pt018930_POPTR_    M D S Q W D Y K N F G N A - - P P G Q S S V T - - K P Q E N P F - L I R Q S S V Y S L T F D E F Q N T W G G G L R K D F
 
AT3G19290.1     G S M N M D E L L K S I W T A E E A Q A M A M T S A P A A T A V A Q P G A G I P P P G G N L Q R Q G S L T L P R T I S Q
pt018930_POPTR_    G S M N M E E L L K N I W T A E E T Q A M T N T - - - - - L G V G S E G S A - - - P G G N L Q R Q G S L T L P R T L S Q
 
AT3G19290.1     K T V D E V W K C L I T K - D G N M E G S S G G G G E S N V P P G R Q Q T L G E M T L E E F L F R A G V V R E D N C V Q
pt018930_POPTR_    K T V D E L W R D L I K E T S G A A E D G S G S A G - S N L P Q - R Q Q T L G E T T L E E F L V R A G V V R E D T - - Q
 
AT3G19290.1     Q M G Q V N G N N N N G F Y G - - - - - N S T A A G G L G F G F G Q P N Q N S I T F N G - - - - - - - - T N D S M I L N
pt018930_POPTR_    Q I G R - - - P D N S G F F G E L S L L N N N N D S S L A I G F Q Q P N G N - - - - N G L M G T W R M E N N G N L V A N
 
AT3G19290.1     Q P P G L G L K M G G T M Q Q Q Q - - Q Q Q Q L L Q Q Q Q Q Q M Q Q L N Q P H P Q Q R L P Q T I F P K - Q A N V A F S A
pt018930_POPTR_    Q P P S L T L D A G G I R P T Q Q L P Q S R Q L S Q Q Q - - - - - - - - - - - - - - - - - Q L L F P K P A A T V A F A S
 
AT3G19290.1     P V N I T N - - - - - - - - - - K G F A G A A N N S I N N N N G L A S Y G G T G V T V A A T S P G T S S A E N N S L S P
pt018930_POPTR_    P L H L S N N A Q L A S P G V R R S V V G I A D R S V - - N N G L A H S G G M G I V S L A T - - G G S N A D T S S L S P
 
AT3G19290.1     V P Y V L N R G R R S N T G L E K V I E R R Q R R M I K N R E S A A R S R A R K Q A Y T L E L E A E I E K L K K T N Q E
pt018930_POPTR_    V P Y V F S R G R K A S T A L E K V A E R R Q R R M I K N R E S A A R S R T L K Q A H T Q K L E D E V A K L K E L N E V
 
AT3G19290.1     L Q K K Q A E M V E M Q K N E L K E T S K R P W G S K R Q C L R R T L T G P W
pt018930_POPTR_    L Q R K Q A E I I E M Q Q N Q F F E T K K A Q W G G K R Q C L R R T L T G P W
 
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