fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G19290.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm008842 not found in 417aa AT1G45249.1 not_not 0.410472972 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G19290.1     MGTHINFNNLG---GGGHPGGEGSSNQMKPTGSVMPLARQSSVYSLTFDELQNTLGGPGK
gm008842_Glyma0 ----MNFKSFGNEAGGG--GGRQAGN--------FSLTRQPSVYSLTFDEFMNSMGGSGK
                    :**:.:*   ***  **. :.*        :.*:**.*********: *::**.**

AT3G19290.1     DFGSMNMDELLKSIWTAEEAQAMAMTSAPAATAVAQPGAGIPPPGGNLQRQGSLTLPRTI
gm008842_Glyma0 DFGSMNMDELLKNIWTAEEVQTM----ASAGVAADDGGAGV----SHLQRQGSLTLPRTL
                ************.******.*:*    *.*..*. : ***:    .:************:

AT3G19290.1     SQKTVDEVWKCLITKDGNMEGSSGGGGESNVPPGRQQTLGEMTLEEFLFRAGVVRED---
gm008842_Glyma0 SQKTVDEVWKD-ISKD--------HGGPNLAQTQREPTLGEVTLEEFLVRAGVVREDAKP
                **********  *:**         ** . . . *: ****:******.********   

AT3G19290.1     --NCVQQMGQVNGNNNNGFYGNSTAAGGLGFGFGQPNQ---------NSITFNGTNDSMI
gm008842_Glyma0 NESVFVDLSRV-GNNS-----------GLGLGFQQRNKVAAATGLMGNRL----NNDPLV
                  . . ::.:* ***.           ***:** * *:         * :    .**.::

AT3G19290.1     LNQPPG-LGLKMGGTMQQQQQQQQLLQQQQQQMQQLNQPHPQQRLPQTIFPKQANVAFSA
gm008842_Glyma0 GLQPSANLPLNVNGVRTSNQQPQ--MQSPQSQHQHQHQ-HQQQQ--QQIFPKQSAMSYAA
                  **.. * *::.*.  .:** *  :*. *.* *: :* * **:  * *****: ::::*

AT3G19290.1     ---PVNITNKGFAGAANNSINNNNGLASYGG---------TGVTVAATSP----------
gm008842_Glyma0 AQMPQGMVRGGVVGLG------DQGLSVQGGGIGMVGLAPGSVHVATGSPAANQLSSGDR
                   * .:.. *..* .      ::**:  **          .* **: **          

AT3G19290.1     -GTSSAENNSLSPVPYVLN---RGRRSNTGLEKVIERRQRRMIKNRESAARSRARKQAYT
gm008842_Glyma0 IGKSNGDSSSVSPVPYVFNGSLRGRKNGGAVEKVIERRQRRMIKNRESAARSRARKQAYT
                 *.*..:..*:******:*   ***:.. .:*****************************

AT3G19290.1     LELEAEIEKLKKTNQELQKKQAEMVEMQKNELKETSKRPWGSKRQCLRRTLTGPW
gm008842_Glyma0 MELEAEVAKLKEENQELQKKQAEIMEIQKNQVKEMMNLQREVKRRRLRRTQTGPW
                :*****: ***: **********::*:***::**  :     **: **** ****
BoxShade v3.31 C (beta, 970507) Output
AT3G19290.1     M G T H I N F N N L G - - - G G G H P G G E G S S N Q M K P T G S V M P L A R Q S S V Y S L T F D E L Q N T L G G P G K
gm008842_Glyma0    - - - - M N F K S F G N E A G G G - - G G R Q A G N - - - - - - - - F S L T R Q P S V Y S L T F D E F M N S M G G S G K
 
AT3G19290.1     D F G S M N M D E L L K S I W T A E E A Q A M A M T S A P A A T A V A Q P G A G I P P P G G N L Q R Q G S L T L P R T I
gm008842_Glyma0    D F G S M N M D E L L K N I W T A E E V Q T M - - - - A S A G V A A D D G G A G V - - - - S H L Q R Q G S L T L P R T L
 
AT3G19290.1     S Q K T V D E V W K C L I T K D G N M E G S S G G G G E S N V P P G R Q Q T L G E M T L E E F L F R A G V V R E D - - -
gm008842_Glyma0    S Q K T V D E V W K D - I S K D - - - - - - - - H G G P N L A Q T Q R E P T L G E V T L E E F L V R A G V V R E D A K P
 
AT3G19290.1     - - N C V Q Q M G Q V N G N N N N G F Y G N S T A A G G L G F G F G Q P N Q - - - - - - - - - N S I T F N G T N D S M I
gm008842_Glyma0    N E S V F V D L S R V - G N N S - - - - - - - - - - - G L G L G F Q Q R N K V A A A T G L M G N R L - - - - N N D P L V
 
AT3G19290.1     L N Q P P G - L G L K M G G T M Q Q Q Q Q Q Q Q L L Q Q Q Q Q Q M Q Q L N Q P H P Q Q R L P Q T I F P K Q A N V A F S A
gm008842_Glyma0    G L Q P S A N L P L N V N G V R T S N Q Q P Q - - M Q S P Q S Q H Q H Q H Q - H Q Q Q Q - - Q Q I F P K Q S A M S Y A A
 
AT3G19290.1     - - - P V N I T N K G F A G A A N N S I N N N N G L A S Y G G - - - - - - - - - T G V T V A A T S P - - - - - - - - - -
gm008842_Glyma0    A Q M P Q G M V R G G V V G L G - - - - - - D Q G L S V Q G G G I G M V G L A P G S V H V A T G S P A A N Q L S S G D R
 
AT3G19290.1     - G T S S A E N N S L S P V P Y V L N - - - R G R R S N T G L E K V I E R R Q R R M I K N R E S A A R S R A R K Q A Y T
gm008842_Glyma0    I G K S N G D S S S V S P V P Y V F N G S L R G R K N G G A V E K V I E R R Q R R M I K N R E S A A R S R A R K Q A Y T
 
AT3G19290.1     L E L E A E I E K L K K T N Q E L Q K K Q A E M V E M Q K N E L K E T S K R P W G S K R Q C L R R T L T G P W
gm008842_Glyma0    M E L E A E V A K L K E E N Q E L Q K K Q A E I M E I Q K N Q V K E M M N L Q R E V K R R R L R R T Q T G P W
 
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