fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G19500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020188 not found in 476aa AT3G19500.1 1st_1st 0.241650294 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G19500.1     MGDTAEDQDDRAMMEAEGVTSFSELLMFSDGVLSSSSDHQPEGNVGDGG-EDSLGF----
Sb020188_Sorbi1 ----------------------YQLLLV---IMVKEEEIMAEAGGGRGGYMDLLGLGEDD
                                       :**:.   :: ...:  .*.. * **  * **:    

AT3G19500.1     --------------VFSGKTGS-----------------------RMLCFSG---GYQND
Sb020188_Sorbi1 YLLCLSPSSYFASSVVSATTTSATTTAAASSPTCASYLDMAPAYHHMLSFAGQDQQYHGD
                              *.*..* *                       :**.*:*    *:.*

AT3G19500.1     DESLFL-----EPSVPTSGVSDLDPS--CIKIDCRNSNDACTVDKSTKSSTKKRTGTGNG
Sb020188_Sorbi1 GVLGFQYYGAGDHAIPAAVPQKSSPTTECSSISSMSSSPPATA-ISAVSCSKPQAFKKKG
                .   *      : ::*::  .. .*:  * .*.. .*. ..*.  *: *.:* :: . :*

AT3G19500.1     QESDQNRK-----------PGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKT
Sb020188_Sorbi1 SRSSEQRKAASAAAAAPAAPAAAGGGATNKRP----RVRRERLGERIIALQQLVSPFGKS
                ..*.::**           *.  *    :* .    :**:******* ********:**:

AT3G19500.1     DAASVLHEAMGYIKFLQDQIQVLCSPYLINHSLDGGVV----TGDVMAAMKAKDLRSRGL
Sb020188_Sorbi1 DTASVLHEALGYIRFLHDQVQVLSSPYMQRQPASAAHVPESAAGTVVEPPRPKDLRSRGL
                *:*******:***:**:**:***.***: .:. ... *    :* *: . :.********

AT3G19500.1     CLVPVSSTVHVE-NS---NGADFWS-PATMGHTTSPSLPQGF------------------
Sb020188_Sorbi1 CLVPVSCTEHLAGNSHGGNGADLWSVAAGMAKAAADKGPAGGMLLPGGGGGGGYPRQGHL
                ******.* *:  **   ****:** .* *.:::: . * *                   

AT3G19500.1     -
Sb020188_Sorbi1 A
BoxShade v3.31 C (beta, 970507) Output
AT3G19500.1     M G D T A E D Q D D R A M M E A E G V T S F S E L L M F S D G V L S S S S D H Q P E G N V G D G G - E D S L G F - - - -
Sb020188_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - Y Q L L L V - - - I M V K E E E I M A E A G G G R G G Y M D L L G L G E D D
 
AT3G19500.1     - - - - - - - - - - - - - - V F S G K T G S - - - - - - - - - - - - - - - - - - - - - - - R M L C F S G - - - G Y Q N D
Sb020188_Sorbi1    Y L L C L S P S S Y F A S S V V S A T T T S A T T T A A A S S P T C A S Y L D M A P A Y H H M L S F A G Q D Q Q Y H G D
 
AT3G19500.1     D E S L F L - - - - - E P S V P T S G V S D L D P S - - C I K I D C R N S N D A C T V D K S T K S S T K K R T G T G N G
Sb020188_Sorbi1    G V L G F Q Y Y G A G D H A I P A A V P Q K S S P T T E C S S I S S M S S S P P A T A - I S A V S C S K P Q A F K K K G
 
AT3G19500.1     Q E S D Q N R K - - - - - - - - - - - P G K K G K R N Q E K S S V G I A K V R K E R L G E R I A A L Q Q L V S P Y G K T
Sb020188_Sorbi1    S R S S E Q R K A A S A A A A A P A A P A A A G G G A T N K R P - - - - R V R R E R L G E R I I A L Q Q L V S P F G K S
 
AT3G19500.1     D A A S V L H E A M G Y I K F L Q D Q I Q V L C S P Y L I N H S L D G G V V - - - - T G D V M A A M K A K D L R S R G L
Sb020188_Sorbi1    D T A S V L H E A L G Y I R F L H D Q V Q V L S S P Y M Q R Q P A S A A H V P E S A A G T V V E P P R P K D L R S R G L
 
AT3G19500.1     C L V P V S S T V H V E - N S - - - N G A D F W S - P A T M G H T T S P S L P Q G F - - - - - - - - - - - - - - - - - -
Sb020188_Sorbi1    C L V P V S C T E H L A G N S H G G N G A D L W S V A A G M A K A A A D K G P A G G M L L P G G G G G G G Y P R Q G H L
 
AT3G19500.1     -
Sb020188_Sorbi1    A
 
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