fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G19500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028902 not found in 281aa AT3G19500.1 1st_1st 0.298624754 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G19500.1     MGDTAEDQDDRAMMEAEGVTSFSELLMFSDGVLSSSSDHQPEGNVGDGGEDSLGF-----
gm028902_Glyma1 MEAKKEYEVDH--LSTPTGTSFSQLLFGDD------DDDVDESALGLAVDQSYSYNYNNL
                *  . * : *:  :.:   ****:**: .*      .*.  *. :* . ::* .:     

AT3G19500.1     ----VFSGKTGSRMLCFSGGYQNDDESLFL-------EPSVPTSGVSDLDPSCIKIDCRN
gm028902_Glyma1 TRSPLFSIHKAPQMLCF-GNHQNEEGGVLLPETNVTPQKSVITSSDSS---SASASSCNH
                    :** :...:**** *.:**:: .::*       : ** **. *.   *.   .*.:

AT3G19500.1     SNDAC-TVDKSTKSSTKKR------TGTGNGQESDQNRKPGKKGKRNQEKSSVGIAKVRK
gm028902_Glyma1 TNTAFNSLPKSNNSLQKKRQEGVAKVGVGSQRQTKKNKA--------ENPTSTGHAK-RK
                :* *  :: **.:*  ***      .*.*. :::.:*:         :: :*.* ** **

AT3G19500.1     ERLGERIAALQQLVSPYGKTDAASVLHEAMGYIKFLQDQIQVLCSPYL--------INHS
gm028902_Glyma1 EKLGERIATLQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQSLPSSYHQNQH
                *:******:*******:****:***********:**:**:********         *: 

AT3G19500.1     LDGGVVTGDVMAAMKAKDLRSRGLCLVPVSSTVHVENSNGADFWSPATMGHTTSPSLPQG
gm028902_Glyma1 GGGGNNEEEV-----NKDLRSKGLCLIPVGCTVHVAGSNGADFWSSAAIGNNVSFTISQA
                 .**    :*      *****:****:**..**** .********.*::*:..* ::.*.

AT3G19500.1     F------
gm028902_Glyma1 VKRNQDQ
                .
BoxShade v3.31 C (beta, 970507) Output
AT3G19500.1     M G D T A E D Q D D R A M M E A E G V T S F S E L L M F S D G V L S S S S D H Q P E G N V G D G G E D S L G F - - - - -
gm028902_Glyma1    M E A K K E Y E V D H - - L S T P T G T S F S Q L L F G D D - - - - - - D D D V D E S A L G L A V D Q S Y S Y N Y N N L
 
AT3G19500.1     - - - - V F S G K T G S R M L C F S G G Y Q N D D E S L F L - - - - - - - E P S V P T S G V S D L D P S C I K I D C R N
gm028902_Glyma1    T R S P L F S I H K A P Q M L C F - G N H Q N E E G G V L L P E T N V T P Q K S V I T S S D S S - - - S A S A S S C N H
 
AT3G19500.1     S N D A C - T V D K S T K S S T K K R - - - - - - T G T G N G Q E S D Q N R K P G K K G K R N Q E K S S V G I A K V R K
gm028902_Glyma1    T N T A F N S L P K S N N S L Q K K R Q E G V A K V G V G S Q R Q T K K N K A - - - - - - - - E N P T S T G H A K - R K
 
AT3G19500.1     E R L G E R I A A L Q Q L V S P Y G K T D A A S V L H E A M G Y I K F L Q D Q I Q V L C S P Y L - - - - - - - - I N H S
gm028902_Glyma1    E K L G E R I A T L Q Q L V S P F G K T D T A S V L H E A M G Y I R F L H D Q V Q V L C S P Y L Q S L P S S Y H Q N Q H
 
AT3G19500.1     L D G G V V T G D V M A A M K A K D L R S R G L C L V P V S S T V H V E N S N G A D F W S P A T M G H T T S P S L P Q G
gm028902_Glyma1    G G G G N N E E E V - - - - - N K D L R S K G L C L I P V G C T V H V A G S N G A D F W S S A A I G N N V S F T I S Q A
 
AT3G19500.1     F - - - - - -
gm028902_Glyma1    V K R N Q D Q
 
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