fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G19510.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm054548 not found in 633aa AT3G19510.1 1st_1st 0.231848184 Ib

Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G19510.1     MYKAVSKRVTRSSGSGLKQTNVDNGGEISPTVDRVSEQGKSSEAGSHMPTDANGNGHLHH
gm054548_Glyma2 --------------------------------------MQSSPAQANMSS--------VN
                                                       :** * ::*.:         :

AT3G19510.1     EIMDHGKGNEEQKPTPQTVKKDSNTNTKFSGSHRELVIGLPCRGQFEIHNRSRASTSSKR
gm054548_Glyma2 ELLD--------QPSGDVVNNITNCSEKMSNS--------PS------HSQSRRKGSSGR
                *::*        :*: :.*:: :* . *:*.*        *.      *.:** . ** *

AT3G19510.1     LGGGGERNVLFASHKRAQRSKEDAGPSS--VVANST-----PVGRPKKKNKTMNKGQVRE
gm054548_Glyma2 -----------ALRSRTKEKPKEPEPTSNLVDGNSNDGVKRKSGRKKKKR--------RE
                           * :.*::.. ::. *:*  * .**.       ** ***.        **

AT3G19510.1     D---DEYTRIKKKLRYFLNRINYEQSLIDAYSLEGWKGSSLEKIRPEKELERATKEILRR
gm054548_Glyma2 EGITDQFSRIRSHLRYLLNRISYENSLIDAYSGEGWKGYSMEKLKPEKELQRAKSEILRR
                :   *:::**:.:***:****.**:******* ***** *:**::*****:**..*****

AT3G19510.1     KLKIRDLFQHLDTLCAEGSLPESLFDTDGEISSEDIFCAKCGSKDLSVDNDIILCDGFCD
gm054548_Glyma2 KLKIRDLFRNLDSLCAEGKFPESLFDSAGEIDSEDIFCAKCQSKELSTNNDIILCDGVCD
                ********::**:*****.:******: ***.********* **:**.:********.**

AT3G19510.1     RGFHQYCLEPPLRKEDIPPDDEGWLCPGCDCKDDSLDLLNDSLGTKFSVSDSWEKIFPEA
gm054548_Glyma2 RGFHQLCLDPPLLTEDIPPGDEGWLCPGCDCKDDCMDLVNDSFGTSLSISDTWERVFPEA
                ***** **:*** .*****.**************.:**:***:**.:*:**:**::****

AT3G19510.1     AAALVGGGQNLDCD--LPSDDSDDEEYDPDCLNDNENDEDGSDDNEESENEDGSSDETEF
gm054548_Glyma2 ASF---AGNNMDNNLGLPSDDSDDDDYNP----------NGSDD-VKIEGDESSSDESEY
                *:    .*:*:* :  ********::*:*          :****  : *.::.****:*:

AT3G19510.1     TSASDEMIESFKEGKDIMKDVMALPSDDSEDDDYDPDAP--TCDDDKESSNSDCTSDTED
gm054548_Glyma2 ASASEKL-----EGGSHEDQYLGLPSEDSDDGDYDPDAPDVDCKVNEESSSSDFTSDSED
                :***:::     ** .  .: :.***:**:*.*******   *. ::***.** ***:**

AT3G19510.1     LETSFKGDETNQQAEDTPLEDPGRQTSQLQG-----------DAILESDVGLDDGPAGVS
gm054548_Glyma2 LAAAFE-DNT------SPGQDGGINSSKKKGKVGKLSMADELSSLLEPDSG-QGGPTPVS
                * ::*: *:*      :* :* * ::*: :*           .::**.* * :.**: **

AT3G19510.1     RRRNVERLDYKKLYDEEYDNVPTSSSDDDDWDKTARMGKEDSESEDEGDTVPLKQSSNAE
gm054548_Glyma2 GKRHVERLDYKKLYEV-------------NWNDAAAPSRKKKLT---GNVTPVSPNANAS
                 :*:**********:              :*:.:*  .::.. :   *:..*:. .:**.

AT3G19510.1     DHTSKKLIRKSKRADKKDTLEMPQEGPGENGGSGEIEK-SSSSACKQT-DPKTQRLYISF
gm054548_Glyma2 NNSIHTLKRNAHQNKVENTNSSPTKSLDGRSKSGSRDKRSGSSAHKRLGEAVVQRLHKSF
                ::: :.* *:::: . ::* . * :. . .. **. :* *.*** *:  :. .***: **

AT3G19510.1     QENQYPDKATKESLAKELQMTVKQVNNWFKHRRWSI------------NSKPLVSEENVE
gm054548_Glyma2 KENQYPDRSTKESLAQELGLTYQQVAKWFDNTRWSFRHSSQMETNSGRNASPEATDGRAE
                :******::******:** :* :** :**.: ***:            *:.* .:: ..*

AT3G19510.1     KLKTGKEGE--CETSVAGSSKQTMETESVAEKPTNTGSRKRR-------------RK
gm054548_Glyma2 -----NEGEKQCE---------SMSPEVSGKNSKTTSSRKRKHFNKFTKCSSNASRQ
                     :***  **         :*..*  .::...*.****:             *:


BoxShade v3.31 C (beta, 970507) Output
AT3G19510.1     M Y K A V S K R V T R S S G S G L K Q T N V D N G G E I S P T V D R V S E Q G K S S E A G S H M P T D A N G N G H L H H
gm054548_Glyma2    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q S S P A Q A N M S S - - - - - - - - V N
 
AT3G19510.1     E I M D H G K G N E E Q K P T P Q T V K K D S N T N T K F S G S H R E L V I G L P C R G Q F E I H N R S R A S T S S K R
gm054548_Glyma2    E L L D - - - - - - - - Q P S G D V V N N I T N C S E K M S N S - - - - - - - - P S - - - - - - H S Q S R R K G S S G R
 
AT3G19510.1     L G G G G E R N V L F A S H K R A Q R S K E D A G P S S - - V V A N S T - - - - - P V G R P K K K N K T M N K G Q V R E
gm054548_Glyma2    - - - - - - - - - - - A L R S R T K E K P K E P E P T S N L V D G N S N D G V K R K S G R K K K K R - - - - - - - - R E
 
AT3G19510.1     D - - - D E Y T R I K K K L R Y F L N R I N Y E Q S L I D A Y S L E G W K G S S L E K I R P E K E L E R A T K E I L R R
gm054548_Glyma2    E G I T D Q F S R I R S H L R Y L L N R I S Y E N S L I D A Y S G E G W K G Y S M E K L K P E K E L Q R A K S E I L R R
 
AT3G19510.1     K L K I R D L F Q H L D T L C A E G S L P E S L F D T D G E I S S E D I F C A K C G S K D L S V D N D I I L C D G F C D
gm054548_Glyma2    K L K I R D L F R N L D S L C A E G K F P E S L F D S A G E I D S E D I F C A K C Q S K E L S T N N D I I L C D G V C D
 
AT3G19510.1     R G F H Q Y C L E P P L R K E D I P P D D E G W L C P G C D C K D D S L D L L N D S L G T K F S V S D S W E K I F P E A
gm054548_Glyma2    R G F H Q L C L D P P L L T E D I P P G D E G W L C P G C D C K D D C M D L V N D S F G T S L S I S D T W E R V F P E A
 
AT3G19510.1     A A A L V G G G Q N L D C D - - L P S D D S D D E E Y D P D C L N D N E N D E D G S D D N E E S E N E D G S S D E T E F
gm054548_Glyma2    A S F - - - A G N N M D N N L G L P S D D S D D D D Y N P - - - - - - - - - - N G S D D - V K I E G D E S S S D E S E Y
 
AT3G19510.1     T S A S D E M I E S F K E G K D I M K D V M A L P S D D S E D D D Y D P D A P - - T C D D D K E S S N S D C T S D T E D
gm054548_Glyma2    A S A S E K L - - - - - E G G S H E D Q Y L G L P S E D S D D G D Y D P D A P D V D C K V N E E S S S S D F T S D S E D
 
AT3G19510.1     L E T S F K G D E T N Q Q A E D T P L E D P G R Q T S Q L Q G - - - - - - - - - - - D A I L E S D V G L D D G P A G V S
gm054548_Glyma2    L A A A F E - D N T - - - - - - S P G Q D G G I N S S K K K G K V G K L S M A D E L S S L L E P D S G - Q G G P T P V S
 
AT3G19510.1     R R R N V E R L D Y K K L Y D E E Y D N V P T S S S D D D D W D K T A R M G K E D S E S E D E G D T V P L K Q S S N A E
gm054548_Glyma2    G K R H V E R L D Y K K L Y E V - - - - - - - - - - - - - N W N D A A A P S R K K K L T - - - G N V T P V S P N A N A S
 
AT3G19510.1     D H T S K K L I R K S K R A D K K D T L E M P Q E G P G E N G G S G E I E K - S S S S A C K Q T - D P K T Q R L Y I S F
gm054548_Glyma2    N N S I H T L K R N A H Q N K V E N T N S S P T K S L D G R S K S G S R D K R S G S S A H K R L G E A V V Q R L H K S F
 
AT3G19510.1     Q E N Q Y P D K A T K E S L A K E L Q M T V K Q V N N W F K H R R W S I - - - - - - - - - - - - N S K P L V S E E N V E
gm054548_Glyma2    K E N Q Y P D R S T K E S L A Q E L G L T Y Q Q V A K W F D N T R W S F R H S S Q M E T N S G R N A S P E A T D G R A E
 
AT3G19510.1     K L K T G K E G E - - C E T S V A G S S K Q T M E T E S V A E K P T N T G S R K R R - - - - - - - - - - - - - R K
gm054548_Glyma2    - - - - - N E G E K Q C E - - - - - - - - - S M S P E V S G K N S K T T S S R K R K H F N K F T K C S S N A S R Q
 
0