fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G19860.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021183 not found in 323aa AT3G19860.2 1st_not 0.576086956 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G19860.1     MD--------------------------------VSARKSQKAGREKLRREKLNEHFVEL
pt021183_POPTR_ MDPFTDFNPPPAVPRHVPSTHPDPISSEAELKDSVAARKIQKADREKLRRDRLNEHFVEL
                **                                *:*** ***.******::********

AT3G19860.1     GNVLDPERPKNDKATILTDTVQLLKELTSEVNKLKSEYTALTDESRELTQEKNDLREEKT
pt021183_POPTR_ GNTLDPDRPKNDKATILADTVQLLKDLNSKVDKLKAEHAALSEESRELTLEKNDLREEKA
                **.***:**********:*******:*.*:*:***:*::**::****** *********:

AT3G19860.1     SLKSDIENLNLQYQQRLRSMSPWGAAMDHTVMMAPPPSFPYPMPIAMPPGSIPMHPSMPS
pt021183_POPTR_ SLKSDVENLNIQCQQQLRATYPW-AAMDHSVMMA-PPSYPFPMPVPMPPGPIPMHPSMQP
                *****:****:* **:**:  ** *****:**** ***:*:***:.****.******* .

AT3G19860.1     YTYFGNQNPSMIPAPCPTYMPYMPPNTVVEQQSV-HIPQNPGNRSR-------EPRAKVS
pt021183_POPTR_ YPFYGNQNPAVIHNPCSTFVPYIAPNTLFDQQSAQHVSSLAQSASRSHVSVKQDSKNKSS
                *.::*****::*  **.*::**:.***:.:***. *:.. . . **       :.: * *

AT3G19860.1     RESRSEKAEDSNEVATQLELKTPGSTSDKD--TLQRPEKTKRCKRNNNNNSIEESSHSSK
pt021183_POPTR_ GESKVEKSKDSNDVTTDLELKTPGSTADQDLTSVQRKSK----KSTGKESSVTKESSSSR
                 **: **::***:*:*:*********:*:*  ::** .*    * ..::.*: :.* **:

AT3G19860.1     CSSSPSVRDHSSSSSVAGGQKPDDAK----
pt021183_POPTR_ CSSSHSVQD-SSSNSVVGNTKVDDLDKREN
                **** **:* ***.**.*. * ** .
BoxShade v3.31 C (beta, 970507) Output
AT3G19860.1     M D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V S A R K S Q K A G R E K L R R E K L N E H F V E L
pt021183_POPTR_    M D P F T D F N P P P A V P R H V P S T H P D P I S S E A E L K D S V A A R K I Q K A D R E K L R R D R L N E H F V E L
 
AT3G19860.1     G N V L D P E R P K N D K A T I L T D T V Q L L K E L T S E V N K L K S E Y T A L T D E S R E L T Q E K N D L R E E K T
pt021183_POPTR_    G N T L D P D R P K N D K A T I L A D T V Q L L K D L N S K V D K L K A E H A A L S E E S R E L T L E K N D L R E E K A
 
AT3G19860.1     S L K S D I E N L N L Q Y Q Q R L R S M S P W G A A M D H T V M M A P P P S F P Y P M P I A M P P G S I P M H P S M P S
pt021183_POPTR_    S L K S D V E N L N I Q C Q Q Q L R A T Y P W - A A M D H S V M M A - P P S Y P F P M P V P M P P G P I P M H P S M Q P
 
AT3G19860.1     Y T Y F G N Q N P S M I P A P C P T Y M P Y M P P N T V V E Q Q S V - H I P Q N P G N R S R - - - - - - - E P R A K V S
pt021183_POPTR_    Y P F Y G N Q N P A V I H N P C S T F V P Y I A P N T L F D Q Q S A Q H V S S L A Q S A S R S H V S V K Q D S K N K S S
 
AT3G19860.1     R E S R S E K A E D S N E V A T Q L E L K T P G S T S D K D - - T L Q R P E K T K R C K R N N N N N S I E E S S H S S K
pt021183_POPTR_    G E S K V E K S K D S N D V T T D L E L K T P G S T A D Q D L T S V Q R K S K - - - - K S T G K E S S V T K E S S S S R
 
AT3G19860.1     C S S S P S V R D H S S S S S V A G G Q K P D D A K - - - -
pt021183_POPTR_    C S S S H S V Q D - S S S N S V V G N T K V D D L D K R E N
 
0