fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G19860.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb025437 not found in 420aa AT3G19860.2 1st_not 0.467391304 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G19860.1     ----------------------------------MDVSARKSQKAGREKLRREKLNEHFV
Sb025437_Sorbi1 SDRRPTPLLPMSSSGPLPATGTHHGSQRAECKAQGSTSARKVQKADREKMRRDKLNEQFQ
                                                   ..**** ***.***:**:****:* 

AT3G19860.1     ELGNVLDPERPKNDKATILTDTVQLLKELTSEVNKLKSEYTALTDESRELTQEKNDLREE
Sb025437_Sorbi1 DLGNALDPDRPRNDKATILGDTIQMLKDLTTQVNKLKAEYTSLSEEARELTQEKNELRDE
                :***.***:**:******* **:*:**:**::*****:***:*::*:********:**:*

AT3G19860.1     KTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVMMAPPPSFPYPMPIAMPPGSIPMHPSM
Sb025437_Sorbi1 KASLKSEVDNLNNQYQQRMRVLYPW-AGMEPSVVMGPPPAYPYPVPVHIPSGAVPMHPQL
                *:****:::*** *****:* : ** *.*: :*:*.***::***:*: :*.*::****.:

AT3G19860.1     PSYTYFGNQNPSMIPAPCPTYMPYMPP------------NTVVEQQSVHIPQNPGNRSRE
Sb025437_Sorbi1 QTYPFFHSQTSGTIPNACIPYMAYTQPCHLPTDQPSNQLNTPVGHSSSHRSNSPAQDCRS
                 :*.:* .*... ** .* .**.*  *            ** * :.* * .:.*.: .*.

AT3G19860.1     PRAKVSRESRSEKAEDSNEVATQLELKTPGST-------SDKDTLQRPEKTKRCKRNNNN
Sb025437_Sorbi1 KSSTPQQPSCGMRSSDVGDIATDLELKTPGSSCQSHSEIANNDSSSDLKTKKHCIKQING
                  :. .: * . ::.* .::**:********:       :::*: .  :..*:* :: *.

AT3G19860.1     NSIEESSHSSKCSSS--PSVRDHSSSSSVAGGQKPDDAK
Sb025437_Sorbi1 CTLTESSSSSRCSSSGPPDV----SNSAV------DE--
                 :: *** **:****  *.*    *.*:*      *:
BoxShade v3.31 C (beta, 970507) Output
AT3G19860.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D V S A R K S Q K A G R E K L R R E K L N E H F V
Sb025437_Sorbi1    S D R R P T P L L P M S S S G P L P A T G T H H G S Q R A E C K A Q G S T S A R K V Q K A D R E K M R R D K L N E Q F Q
 
AT3G19860.1     E L G N V L D P E R P K N D K A T I L T D T V Q L L K E L T S E V N K L K S E Y T A L T D E S R E L T Q E K N D L R E E
Sb025437_Sorbi1    D L G N A L D P D R P R N D K A T I L G D T I Q M L K D L T T Q V N K L K A E Y T S L S E E A R E L T Q E K N E L R D E
 
AT3G19860.1     K T S L K S D I E N L N L Q Y Q Q R L R S M S P W G A A M D H T V M M A P P P S F P Y P M P I A M P P G S I P M H P S M
Sb025437_Sorbi1    K A S L K S E V D N L N N Q Y Q Q R M R V L Y P W - A G M E P S V V M G P P P A Y P Y P V P V H I P S G A V P M H P Q L
 
AT3G19860.1     P S Y T Y F G N Q N P S M I P A P C P T Y M P Y M P P - - - - - - - - - - - - N T V V E Q Q S V H I P Q N P G N R S R E
Sb025437_Sorbi1    Q T Y P F F H S Q T S G T I P N A C I P Y M A Y T Q P C H L P T D Q P S N Q L N T P V G H S S S H R S N S P A Q D C R S
 
AT3G19860.1     P R A K V S R E S R S E K A E D S N E V A T Q L E L K T P G S T - - - - - - - S D K D T L Q R P E K T K R C K R N N N N
Sb025437_Sorbi1    K S S T P Q Q P S C G M R S S D V G D I A T D L E L K T P G S S C Q S H S E I A N N D S S S D L K T K K H C I K Q I N G
 
AT3G19860.1     N S I E E S S H S S K C S S S - - P S V R D H S S S S S V A G G Q K P D D A K
Sb025437_Sorbi1    C T L T E S S S S S R C S S S G P P D V - - - - S N S A V - - - - - - D E - -
 
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