fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G19860.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021380 not found in 282aa AT3G19860.2 1st_not 0.582608695 II
Gm042821 not found in 281aa AT3G19860.1 not_1st 0.558695652 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G19860.1     MDVS-ARKSQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTVQLLKELTSEV
gm042821_Glyma1 MDCSAARKTQKADREKLRRDRINEQFVELGNILDPDRPKNDKATILCDTIQLLKDLISQV
gm021380_Glyma0 MDCSAARKTQKADREKLRRDRLNEQFVELGNILDPDRPKNDKATIIGDTIQLLKDLTSQV
                ** * ***:***.******:::**:******:***:*********: **:****:* *:*

AT3G19860.1     NKLKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTV
gm042821_Glyma1 SKLKDEYAMLNEESRELTLEKTDLREEKASLKSDIDNLNNQYQQQLRTMFPW-TAMEHSV
gm021380_Glyma0 SKLKDEYATLNEESRELTQEKNDLREEKASLKSDIGNLNNQYQQQLRTMFPW-TAMDHSV
                .***.**: *.:****** **.******:****** *** ****:**:* ** :**:*:*

AT3G19860.1     MMAPPPSFPYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPTYMPYMPPNTVVEQ
gm042821_Glyma1 MMA-PSSYPYPVPMAVPPGPIPMQP----YPFFANQHPAVISNPCSTYVPYLAPNTIVEQ
gm021380_Glyma0 MMA-PPSYPYPVPMAVPPGPIPMQP----YPFFANQHPAVISNPCSTYVPYLAPNTIVEQ
                *** *.*:***:*:*:***.***:*    *.:*.**:*::*. **.**:**:.***:***

AT3G19860.1     QS---VHIPQNPGNRS-----REPRAKVSRESRSEKAEDSNEVATQLELKTPGSTSDKDT
gm042821_Glyma1 QSTLYVSPPLHPGARPNVSGKQESKSKSSRESMAEKNEESNDVTTDLELKTPGSSADQDL
gm021380_Glyma0 QSTQYVSPPLHPCGRSNVSGKQESKSKSSRESKAEKNEDSNDVTTDLELKTPGSSADQDL
                **   *  * :*  *.     :*.::* **** :** *:**:*:*:********::*:* 

AT3G19860.1     LQRPEKTKRCKRNNNNNSIEESSHSSKCSSSPSVRDHSSSSSVAGGQKPDDAK
gm042821_Glyma1 SSGQRKSSKLSR--RESSCTEWSSLGRCSSC-SVQD-SSSSSVVASRKDNE--
gm021380_Glyma0 SSRQRKSSKLSR--RESSCTEGSSLGRCSSSRSVQD-SSSSSVAASRKDNE--
                 .  .*:.: .*  .:.*  * *  .:***. **:* ******...:* ::
BoxShade v3.31 C (beta, 970507) Output
AT3G19860.1     M D V S - A R K S Q K A G R E K L R R E K L N E H F V E L G N V L D P E R P K N D K A T I L T D T V Q L L K E L T S E V
gm042821_Glyma1    M D C S A A R K T Q K A D R E K L R R D R I N E Q F V E L G N I L D P D R P K N D K A T I L C D T I Q L L K D L I S Q V
gm021380_Glyma0    M D C S A A R K T Q K A D R E K L R R D R L N E Q F V E L G N I L D P D R P K N D K A T I I G D T I Q L L K D L T S Q V
 
AT3G19860.1     N K L K S E Y T A L T D E S R E L T Q E K N D L R E E K T S L K S D I E N L N L Q Y Q Q R L R S M S P W G A A M D H T V
gm042821_Glyma1    S K L K D E Y A M L N E E S R E L T L E K T D L R E E K A S L K S D I D N L N N Q Y Q Q Q L R T M F P W - T A M E H S V
gm021380_Glyma0    S K L K D E Y A T L N E E S R E L T Q E K N D L R E E K A S L K S D I G N L N N Q Y Q Q Q L R T M F P W - T A M D H S V
 
AT3G19860.1     M M A P P P S F P Y P M P I A M P P G S I P M H P S M P S Y T Y F G N Q N P S M I P A P C P T Y M P Y M P P N T V V E Q
gm042821_Glyma1    M M A - P S S Y P Y P V P M A V P P G P I P M Q P - - - - Y P F F A N Q H P A V I S N P C S T Y V P Y L A P N T I V E Q
gm021380_Glyma0    M M A - P P S Y P Y P V P M A V P P G P I P M Q P - - - - Y P F F A N Q H P A V I S N P C S T Y V P Y L A P N T I V E Q
 
AT3G19860.1     Q S - - - V H I P Q N P G N R S - - - - - R E P R A K V S R E S R S E K A E D S N E V A T Q L E L K T P G S T S D K D T
gm042821_Glyma1    Q S T L Y V S P P L H P G A R P N V S G K Q E S K S K S S R E S M A E K N E E S N D V T T D L E L K T P G S S A D Q D L
gm021380_Glyma0    Q S T Q Y V S P P L H P C G R S N V S G K Q E S K S K S S R E S K A E K N E D S N D V T T D L E L K T P G S S A D Q D L
 
AT3G19860.1     L Q R P E K T K R C K R N N N N N S I E E S S H S S K C S S S P S V R D H S S S S S V A G G Q K P D D A K
gm042821_Glyma1    S S G Q R K S S K L S R - - R E S S C T E W S S L G R C S S C - S V Q D - S S S S S V V A S R K D N E - -
gm021380_Glyma0    S S R Q R K S S K L S R - - R E S S C T E G S S L G R C S S S R S V Q D - S S S S S V A A S R K D N E - -
 
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