fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G19860.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021379 not found in 283aa AT3G19860.2 not_not 0.565217391 III
Gm042820 not found in 321aa AT3G19860.2 not_not 0.547826086 III
Gm032480 not found in 275aa AT3G19860.2 not_not 0.484782608 III
Gm018647 not found in 329aa AT3G19860.2 not_not 0.482608695 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G19860.1     -------------------------------------------------MDVS-ARKSQK
gm042820_Glyma1 -----------------------------------MITPLEVNEPEVEPMDCSAARKTQK
gm021379_Glyma0 -------------------------------------------------MDCSAARKTQK
gm018647_Glyma0 MDQRKLRDSSNSKPASDAAPQHVTLTSNRFRNSQAAVREREKEKGEGENEDPSAARKVLK
gm032480_Glyma1 -------------------------------------------------MDCTAARKTQK
                                                                  * : ***  *

AT3G19860.1     AGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTVQLLKELTSEVNKLKSEYTALT
gm042820_Glyma1 ADREKLRRDRINEQFVELGNILDPDRPKNDKATILCDTIQLLKDLISQVSKLKDEYAMLN
gm021379_Glyma0 ADREKLRRDRLNEQFVELGNILDPDRPKNDKATIIGDTIQLLKDLTSQVSKLKDEYATLN
gm018647_Glyma0 ADREKLRRDRLNEHFQELGNALDPDRPKNDKATILTETVQMLKDLTAEVNRLKTEHKTLS
gm032480_Glyma1 ADREKLRRDRFNVQFVELGNILDPDRPKNDKATILGDTIQLLKDLTSEVSKLKDEYATLN
                *.******:::* :* **** ***:*********: :*:*:**:* ::*.:** *:  *.

AT3G19860.1     DESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVMMAPPPSFPYP
gm042820_Glyma1 EESRELTLEKTDLREEKASLKSDIDNLNNQYQQQLRTMFPW-TAMEHSVMMA-PSSYPYP
gm021379_Glyma0 EESRELTQEKNDLREEKASLKSDIGNLNNQYQQQLRTMFPW-TAMDHSVMMA-PPSYPYP
gm018647_Glyma0 EESRELMQEKNELREEKTSLKSDIENLNVQYQQRVRIMFPW-SAIDPSAVISQP--YSYP
gm032480_Glyma1 EESCELAQEKNELREEKASLKSDILKLNNQYQQQLRTVSPW-TATDRSIMLA-PPSYPYP
                :** **  **.:*****:****** :** ****::* : ** :* : : ::: *  :.**

AT3G19860.1     MPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPTYMPYMPPNTVVEQQS---VHIPQN
gm042820_Glyma1 VPMAVPPGPIPMQP----YPFFANQHPAVISNPCSTYVPYLAPNTIVEQQSTLYVSPPLH
gm021379_Glyma0 VPMAVPPGPIPMQP----YPFFANQHPAVISNPCSTYVPYLAPNTIVEQQSTQYVSPPLH
gm018647_Glyma0 VPIHIPSAPISIHPSLQPFPFFGNQNPGHIPNPCSMYVPYTTPTS----------HPPVE
gm032480_Glyma1 VPMPIPPAPIAMQP----YPFYANQHSAIIPNPCSTFVPYLVPNTLTEQRSTQYMSPPVH
                :*: :*...*.::*    :.::.**:.. *. **. ::**  *.:            * .

AT3G19860.1     P-----GNRS-----REPRAKV---SRESRSEKAEDSNEVATQLELKTPGSTSD------
gm042820_Glyma1 P-----GARPNVSGKQESKSKS---SRESMAEKNEESNDVTTDLELKTPGSSADQVSVVF
gm021379_Glyma0 P-----CGRSNVSGKQESKSKS---SRESKAEKNEDSNDVTTDLELKTPGSSADQVSVVF
gm018647_Glyma0 PPSMMYASTSHASNQKESGSKSPGHRRSSGAERSSETDDVVTELELKMPGSSSTQ-----
gm032480_Glyma1 P-----GFRSHVSGKQESRNKS---SKESKAEKHEDSNDVTL-----TPGSSAD------
                *        .     :*.  *     :.* :*: .::::*.       ***::       

AT3G19860.1     --------------------------KDTLQRPEKTKRCKRNNNNNSIEESSHSSKCSSS
gm042820_Glyma1 QGYPMIEDASDSSCVCV--SGL----QDLSSGQRKSSKLSRRES--SCTEWSSLGRCS-S
gm021379_Glyma0 QGYPMIEDALDSSCVCLWFAGFIIQTKKIQQVVKEGKQLHRRK----------FIR----
gm018647_Glyma0 --------------------------QGCTSGGRKGKMKDR-----TIIGGSASSQYSSS
gm032480_Glyma1 --------------------------QDLSSGQRKSSKLSRKES--SCTEVSSLDRCSLS
                                          :   .  .: .   *              :    

AT3G19860.1     PSVRDHSSSSSVAGGQKPDDAK
gm042820_Glyma1 CSVQD-SSSSSVVASRKDNE--
gm021379_Glyma0 ----------------------
gm018647_Glyma0 LGLQD--SSNSVGDIPKTDN--
gm032480_Glyma1 CSVQD-SSSSSVVHKHKG----
BoxShade v3.31 C (beta, 970507) Output
AT3G19860.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D V S - A R K S Q K
gm042820_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M I T P L E V N E P E V E P M D C S A A R K T Q K
gm021379_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D C S A A R K T Q K
gm018647_Glyma0    M D Q R K L R D S S N S K P A S D A A P Q H V T L T S N R F R N S Q A A V R E R E K E K G E G E N E D P S A A R K V L K
gm032480_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D C T A A R K T Q K
 
AT3G19860.1     A G R E K L R R E K L N E H F V E L G N V L D P E R P K N D K A T I L T D T V Q L L K E L T S E V N K L K S E Y T A L T
gm042820_Glyma1    A D R E K L R R D R I N E Q F V E L G N I L D P D R P K N D K A T I L C D T I Q L L K D L I S Q V S K L K D E Y A M L N
gm021379_Glyma0    A D R E K L R R D R L N E Q F V E L G N I L D P D R P K N D K A T I I G D T I Q L L K D L T S Q V S K L K D E Y A T L N
gm018647_Glyma0    A D R E K L R R D R L N E H F Q E L G N A L D P D R P K N D K A T I L T E T V Q M L K D L T A E V N R L K T E H K T L S
gm032480_Glyma1    A D R E K L R R D R F N V Q F V E L G N I L D P D R P K N D K A T I L G D T I Q L L K D L T S E V S K L K D E Y A T L N
 
AT3G19860.1     D E S R E L T Q E K N D L R E E K T S L K S D I E N L N L Q Y Q Q R L R S M S P W G A A M D H T V M M A P P P S F P Y P
gm042820_Glyma1    E E S R E L T L E K T D L R E E K A S L K S D I D N L N N Q Y Q Q Q L R T M F P W - T A M E H S V M M A - P S S Y P Y P
gm021379_Glyma0    E E S R E L T Q E K N D L R E E K A S L K S D I G N L N N Q Y Q Q Q L R T M F P W - T A M D H S V M M A - P P S Y P Y P
gm018647_Glyma0    E E S R E L M Q E K N E L R E E K T S L K S D I E N L N V Q Y Q Q R V R I M F P W - S A I D P S A V I S Q P - - Y S Y P
gm032480_Glyma1    E E S C E L A Q E K N E L R E E K A S L K S D I L K L N N Q Y Q Q Q L R T V S P W - T A T D R S I M L A - P P S Y P Y P
 
AT3G19860.1     M P I A M P P G S I P M H P S M P S Y T Y F G N Q N P S M I P A P C P T Y M P Y M P P N T V V E Q Q S - - - V H I P Q N
gm042820_Glyma1    V P M A V P P G P I P M Q P - - - - Y P F F A N Q H P A V I S N P C S T Y V P Y L A P N T I V E Q Q S T L Y V S P P L H
gm021379_Glyma0    V P M A V P P G P I P M Q P - - - - Y P F F A N Q H P A V I S N P C S T Y V P Y L A P N T I V E Q Q S T Q Y V S P P L H
gm018647_Glyma0    V P I H I P S A P I S I H P S L Q P F P F F G N Q N P G H I P N P C S M Y V P Y T T P T S - - - - - - - - - - H P P V E
gm032480_Glyma1    V P M P I P P A P I A M Q P - - - - Y P F Y A N Q H S A I I P N P C S T F V P Y L V P N T L T E Q R S T Q Y M S P P V H
 
AT3G19860.1     P - - - - - G N R S - - - - - R E P R A K V - - - S R E S R S E K A E D S N E V A T Q L E L K T P G S T S D - - - - - -
gm042820_Glyma1    P - - - - - G A R P N V S G K Q E S K S K S - - - S R E S M A E K N E E S N D V T T D L E L K T P G S S A D Q V S V V F
gm021379_Glyma0    P - - - - - C G R S N V S G K Q E S K S K S - - - S R E S K A E K N E D S N D V T T D L E L K T P G S S A D Q V S V V F
gm018647_Glyma0    P P S M M Y A S T S H A S N Q K E S G S K S P G H R R S S G A E R S S E T D D V V T E L E L K M P G S S S T Q - - - - -
gm032480_Glyma1    P - - - - - G F R S H V S G K Q E S R N K S - - - S K E S K A E K H E D S N D V T L - - - - - T P G S S A D - - - - - -
 
AT3G19860.1     - - - - - - - - - - - - - - - - - - - - - - - - - - K D T L Q R P E K T K R C K R N N N N N S I E E S S H S S K C S S S
gm042820_Glyma1    Q G Y P M I E D A S D S S C V C V - - S G L - - - - Q D L S S G Q R K S S K L S R R E S - - S C T E W S S L G R C S - S
gm021379_Glyma0    Q G Y P M I E D A L D S S C V C L W F A G F I I Q T K K I Q Q V V K E G K Q L H R R K - - - - - - - - - - F I R - - - -
gm018647_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - Q G C T S G G R K G K M K D R - - - - - T I I G G S A S S Q Y S S S
gm032480_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - Q D L S S G Q R K S S K L S R K E S - - S C T E V S S L D R C S L S
 
AT3G19860.1     P S V R D H S S S S S V A G G Q K P D D A K
gm042820_Glyma1    C S V Q D - S S S S S V V A S R K D N E - -
gm021379_Glyma0    - - - - - - - - - - - - - - - - - - - - - -
gm018647_Glyma0    L G L Q D - - S S N S V G D I P K T D N - -
gm032480_Glyma1    C S V Q D - S S S S S V V H K H K G - - - -
 
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