fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G20310.1 KTPFQFDLNFPPLDGVD at 216/244 in AT3G20310.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm049039 REPLPFDLNVLPLDDAD in 188/212 AT3G20310.1 1st_1st 0.379581151 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G20310.1     MRKGRGSSVVGPALPVTAGGS----VKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTF
gm049039_Glyma1 --MGRGGTAAA-AVEIAEPGSRPVFFKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTF
                   ***.:... *: ::  **    .**************************:*******

AT3G20310.1     DSAVDAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPF
gm049039_Glyma1 DTAEEAARAYDTAARTLRGPKAKTNFPL--------------------SPPFYHP--DPF
                *:* :**********.***********:                    ***. :   ***

AT3G20310.1     MDHRLYGGG----NFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHA
gm049039_Glyma1 SDHRYFDGAGAGEDFQDHR------RPTSSGMSSTVESFSGPRAAVPAKA------PVIV
                 *** :.*.    :**:::      **:**.*****:* ****.  .* *      *: .

AT3G20310.1     IKRYPRTPPVAPEDCHSDCDSSSSVIDDGDDIASSSSRRKTPFQFDLNFPPLDGVDLFAG
gm049039_Glyma1 NRRYPRTPPVVPEDCRSDCDSSSSVVDDGDGDNVASSFRREPLPFDLNVLPLDDADV---
                 :********.****:*********:****.   :** *: *: ****. ***..*:   

AT3G20310.1     GIDDLHCTDLRL
gm049039_Glyma1 ATDDLFCTVLCL
                . ***.** * *
BoxShade v3.31 C (beta, 970507) Output
AT3G20310.1     M R K G R G S S V V G P A L P V T A G G S - - - - V K E P R Y R G V R K R P W G R F A A E I R D P L K K S R V W L G T F
gm049039_Glyma1    - - M G R G G T A A A - A V E I A E P G S R P V F F K E P R Y R G V R K R P W G R F A A E I R D P L K K A R V W L G T F
 
AT3G20310.1     D S A V D A A R A Y D T A A R N L R G P K A K T N F P I D C S P S S P L Q P L T Y L H N Q N L C S P P V I Q N Q I D P F
gm049039_Glyma1    D T A E E A A R A Y D T A A R T L R G P K A K T N F P L - - - - - - - - - - - - - - - - - - - - S P P F Y H P - - D P F
 
AT3G20310.1     M D H R L Y G G G - - - - N F Q E Q Q Q Q Q I I S R P A S S S M S S T V K S C S G P R P M E A A A A S S S V A K P L H A
gm049039_Glyma1    S D H R Y F D G A G A G E D F Q D H R - - - - - - R P T S S G M S S T V E S F S G P R A A V P A K A - - - - - - P V I V
 
AT3G20310.1     I K R Y P R T P P V A P E D C H S D C D S S S S V I D D G D D I A S S S S R R K T P F Q F D L N F P P L D G V D L F A G
gm049039_Glyma1    N R R Y P R T P P V V P E D C R S D C D S S S S V V D D G D G D N V A S S F R R E P L P F D L N V L P L D D A D V - - -
 
AT3G20310.1     G I D D L H C T D L R L
gm049039_Glyma1    A T D D L F C T V L C L
 
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