Input
| Putative repression domain
|
|
AT3G20310.1 |
KTPFQFDLNFPPLDGVD at 216/244 in AT3G20310.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm049039 |
REPLPFDLNVLPLDDAD in 188/212 |
AT3G20310.1 |
1st_1st |
0.379581151 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G20310.1 MRKGRGSSVVGPALPVTAGGS----VKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTF
gm049039_Glyma1 --MGRGGTAAA-AVEIAEPGSRPVFFKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTF
***.:... *: :: ** .**************************:*******
AT3G20310.1 DSAVDAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPF
gm049039_Glyma1 DTAEEAARAYDTAARTLRGPKAKTNFPL--------------------SPPFYHP--DPF
*:* :**********.***********: ***. : ***
AT3G20310.1 MDHRLYGGG----NFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHA
gm049039_Glyma1 SDHRYFDGAGAGEDFQDHR------RPTSSGMSSTVESFSGPRAAVPAKA------PVIV
*** :.*. :**::: **:**.*****:* ****. .* * *: .
AT3G20310.1 IKRYPRTPPVAPEDCHSDCDSSSSVIDDGDDIASSSSRRKTPFQFDLNFPPLDGVDLFAG
gm049039_Glyma1 NRRYPRTPPVVPEDCRSDCDSSSSVVDDGDGDNVASSFRREPLPFDLNVLPLDDADV---
:********.****:*********:****. :** *: *: ****. ***..*:
AT3G20310.1 GIDDLHCTDLRL
gm049039_Glyma1 ATDDLFCTVLCL
. ***.** * *
BoxShade v3.31 C (beta, 970507) Output
AT3G20310.1 |
M |
R |
K |
G |
R |
G |
S |
S |
V |
V |
G |
P |
A |
L |
P |
V |
T |
A |
G |
G |
S |
- |
- |
- |
- |
V |
K |
E |
P |
R |
Y |
R |
G |
V |
R |
K |
R |
P |
W |
G |
R |
F |
A |
A |
E |
I |
R |
D |
P |
L |
K |
K |
S |
R |
V |
W |
L |
G |
T |
F |
gm049039_Glyma1 |
- |
- |
M |
G |
R |
G |
G |
T |
A |
A |
A |
- |
A |
V |
E |
I |
A |
E |
P |
G |
S |
R |
P |
V |
F |
F |
K |
E |
P |
R |
Y |
R |
G |
V |
R |
K |
R |
P |
W |
G |
R |
F |
A |
A |
E |
I |
R |
D |
P |
L |
K |
K |
A |
R |
V |
W |
L |
G |
T |
F |
|
AT3G20310.1 |
D |
S |
A |
V |
D |
A |
A |
R |
A |
Y |
D |
T |
A |
A |
R |
N |
L |
R |
G |
P |
K |
A |
K |
T |
N |
F |
P |
I |
D |
C |
S |
P |
S |
S |
P |
L |
Q |
P |
L |
T |
Y |
L |
H |
N |
Q |
N |
L |
C |
S |
P |
P |
V |
I |
Q |
N |
Q |
I |
D |
P |
F |
gm049039_Glyma1 |
D |
T |
A |
E |
E |
A |
A |
R |
A |
Y |
D |
T |
A |
A |
R |
T |
L |
R |
G |
P |
K |
A |
K |
T |
N |
F |
P |
L |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
P |
P |
F |
Y |
H |
P |
- |
- |
D |
P |
F |
|
AT3G20310.1 |
M |
D |
H |
R |
L |
Y |
G |
G |
G |
- |
- |
- |
- |
N |
F |
Q |
E |
Q |
Q |
Q |
Q |
Q |
I |
I |
S |
R |
P |
A |
S |
S |
S |
M |
S |
S |
T |
V |
K |
S |
C |
S |
G |
P |
R |
P |
M |
E |
A |
A |
A |
A |
S |
S |
S |
V |
A |
K |
P |
L |
H |
A |
gm049039_Glyma1 |
S |
D |
H |
R |
Y |
F |
D |
G |
A |
G |
A |
G |
E |
D |
F |
Q |
D |
H |
R |
- |
- |
- |
- |
- |
- |
R |
P |
T |
S |
S |
G |
M |
S |
S |
T |
V |
E |
S |
F |
S |
G |
P |
R |
A |
A |
V |
P |
A |
K |
A |
- |
- |
- |
- |
- |
- |
P |
V |
I |
V |
|
AT3G20310.1 |
I |
K |
R |
Y |
P |
R |
T |
P |
P |
V |
A |
P |
E |
D |
C |
H |
S |
D |
C |
D |
S |
S |
S |
S |
V |
I |
D |
D |
G |
D |
D |
I |
A |
S |
S |
S |
S |
R |
R |
K |
T |
P |
F |
Q |
F |
D |
L |
N |
F |
P |
P |
L |
D |
G |
V |
D |
L |
F |
A |
G |
gm049039_Glyma1 |
N |
R |
R |
Y |
P |
R |
T |
P |
P |
V |
V |
P |
E |
D |
C |
R |
S |
D |
C |
D |
S |
S |
S |
S |
V |
V |
D |
D |
G |
D |
G |
D |
N |
V |
A |
S |
S |
F |
R |
R |
E |
P |
L |
P |
F |
D |
L |
N |
V |
L |
P |
L |
D |
D |
A |
D |
V |
- |
- |
- |
|
AT3G20310.1 |
G |
I |
D |
D |
L |
H |
C |
T |
D |
L |
R |
L |
gm049039_Glyma1 |
A |
T |
D |
D |
L |
F |
C |
T |
V |
L |
C |
L |
|
|