fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G20550.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm049125 not found in 317aa AT3G20550.1 not_1st 0.731958762 II
Gm024575 not found in 379aa AT3G20550.1 not_1st 0.688144329 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G20550.1     --------MAPSS---------------------------------------RSPSP--R
gm049125_Glyma1 ----------------------------------------------------------MT
gm024575_Glyma0 MGRHSSSNHSPSSSRRHRSHRSSVSPPLRDKHEHSGCSTAKPVRYGSPDSPLRSPSPSLR
                                                                            

AT3G20550.1     TKRLRRARGEKEIGRSREREDDGREREKR-NSRER--DRDIGRDRDRERKGEGERDREVG
gm049125_Glyma1 LKRLKKAQSE------REREPRESERNHG-GSRGRGSERGAGERREKKRTENDEGNGRSN
gm024575_Glyma0 TKRLKKGQSE------REREPRENERNHGDGSRGRGSEREAGERREKKRTENDESNGRSN
                 ***::.:.*      ****    **::  .** *  :*  *. *:::*. :.* : . .

AT3G20550.1     DKRRR---------------------SGREDTEKRRRTRTDD-----ERYSRGRHERSTS
gm049125_Glyma1 KSGKR----------------MEYEDSGGRSSKSEKGTENEDGGGRSNKSSRSRQERSPE
gm024575_Glyma0 KSEKRTEYEDGGGRSSKSDKKMEYEDGGGRSSKSEKRMENDDGGGRSNKSLRSRHERSPE
                .. :*                     .* ..::..:  ..:*     ::  *.*:***..

AT3G20550.1     PSDRSHRSSRR--SPER-----AIASRHDEGSNARGGSEEPNVEEDSVARMRAVEEALAA
gm049125_Glyma1 -RDRNGRSRHRSESPPRHHASAADAKPRDEMINSR-GAEQMDDEDESIRKMKAAEEALEE
gm024575_Glyma0 -RDRNGRSRHRSQSPPRHHASAADAKPRDEMTNAR-EAEQMDDEDDSIRKMKAAEEALEE
                  **. ** :*  ** *     * *. :**  *:*  :*: : *::*: :*:*.****  

AT3G20550.1     KKKEEPSFELSGKLAEETNRYRGITLLFNEPPEARKPSERWRLYVFKDGEPLNEPLCLHR
gm049125_Glyma1 KQKQKPSFELSGKLASETNRVRGVTLLFNEPAEARKPDIKWRLYVFKAGEVLNEPLYIHR
gm024575_Glyma0 KQKQKPSFELSGKLAGETNRVRGVTLLFNEPPEARKPDIKWRLYVFKAGEVLNEPLYIHR
                *:*::********** **** **:*******.*****. :******* ** ***** :**

AT3G20550.1     QSCYLFGRERRIADIPTDHPSCSKQHAVIQYREMEKEKPDGMMGKQVKPYIMDLGSTNKT
gm049125_Glyma1 QSCYLFGRERRVADIPTDHPSCSKQHAVIQFRQVEKEQPDGTLLKQVRPYIMDLGSTNKT
gm024575_Glyma0 QSCYLFGRERRVADIPTDHPSCSKQHAVIQFRQVEKEQPDGTLLKQVRPYVMDLGSTNKT
                ***********:******************:*::***:*** : ***:**:*********

AT3G20550.1     YINESPIEPQRYYELFEKDTIKFGNSSREYVLLHENSAE-
gm049125_Glyma1 FINDGPIEPQRYYELREKDTIKFGNSSREYVLLHENSIGQ
gm024575_Glyma0 FINDSPIEPQRYYELKEKDTIKFGNSR-------------
                :**:.********** **********
BoxShade v3.31 C (beta, 970507) Output
AT3G20550.1     - - - - - - - - M A P S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R S P S P - - R
gm049125_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T
gm024575_Glyma0    M G R H S S S N H S P S S S R R H R S H R S S V S P P L R D K H E H S G C S T A K P V R Y G S P D S P L R S P S P S L R
 
AT3G20550.1     T K R L R R A R G E K E I G R S R E R E D D G R E R E K R - N S R E R - - D R D I G R D R D R E R K G E G E R D R E V G
gm049125_Glyma1    L K R L K K A Q S E - - - - - - R E R E P R E S E R N H G - G S R G R G S E R G A G E R R E K K R T E N D E G N G R S N
gm024575_Glyma0    T K R L K K G Q S E - - - - - - R E R E P R E N E R N H G D G S R G R G S E R E A G E R R E K K R T E N D E S N G R S N
 
AT3G20550.1     D K R R R - - - - - - - - - - - - - - - - - - - - - S G R E D T E K R R R T R T D D - - - - - E R Y S R G R H E R S T S
gm049125_Glyma1    K S G K R - - - - - - - - - - - - - - - - M E Y E D S G G R S S K S E K G T E N E D G G G R S N K S S R S R Q E R S P E
gm024575_Glyma0    K S E K R T E Y E D G G G R S S K S D K K M E Y E D G G G R S S K S E K R M E N D D G G G R S N K S L R S R H E R S P E
 
AT3G20550.1     P S D R S H R S S R R - - S P E R - - - - - A I A S R H D E G S N A R G G S E E P N V E E D S V A R M R A V E E A L A A
gm049125_Glyma1    - R D R N G R S R H R S E S P P R H H A S A A D A K P R D E M I N S R - G A E Q M D D E D E S I R K M K A A E E A L E E
gm024575_Glyma0    - R D R N G R S R H R S Q S P P R H H A S A A D A K P R D E M T N A R - E A E Q M D D E D D S I R K M K A A E E A L E E
 
AT3G20550.1     K K K E E P S F E L S G K L A E E T N R Y R G I T L L F N E P P E A R K P S E R W R L Y V F K D G E P L N E P L C L H R
gm049125_Glyma1    K Q K Q K P S F E L S G K L A S E T N R V R G V T L L F N E P A E A R K P D I K W R L Y V F K A G E V L N E P L Y I H R
gm024575_Glyma0    K Q K Q K P S F E L S G K L A G E T N R V R G V T L L F N E P P E A R K P D I K W R L Y V F K A G E V L N E P L Y I H R
 
AT3G20550.1     Q S C Y L F G R E R R I A D I P T D H P S C S K Q H A V I Q Y R E M E K E K P D G M M G K Q V K P Y I M D L G S T N K T
gm049125_Glyma1    Q S C Y L F G R E R R V A D I P T D H P S C S K Q H A V I Q F R Q V E K E Q P D G T L L K Q V R P Y I M D L G S T N K T
gm024575_Glyma0    Q S C Y L F G R E R R V A D I P T D H P S C S K Q H A V I Q F R Q V E K E Q P D G T L L K Q V R P Y V M D L G S T N K T
 
AT3G20550.1     Y I N E S P I E P Q R Y Y E L F E K D T I K F G N S S R E Y V L L H E N S A E -
gm049125_Glyma1    F I N D G P I E P Q R Y Y E L R E K D T I K F G N S S R E Y V L L H E N S I G Q
gm024575_Glyma0    F I N D S P I E P Q R Y Y E L K E K D T I K F G N S R - - - - - - - - - - - - -
 
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