fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G20550.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp020826 not found in 198aa AT3G20550.1 1st_1st 0.603092783 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G20550.1     MAPSSRSPSPRTKRLRRARGEKEIGRSREREDDGREREKRNSRERDRDIGRDRDRERKGE
pp020826_Pp1s20 ------------------------------------------------------------
                                                                            

AT3G20550.1     GERDREVGDKRRRSGREDTEKRRRTRTDDERYSRGRHERSTSPSDRSHRSSRRSPERAIA
pp020826_Pp1s20 ------------------------------------------------------------
                                                                            

AT3G20550.1     SRHDEGSNARGGSEEPNVEEDSVARMRAVEEALAAKKKEEPSFELSGKLAEETNRYRGIT
pp020826_Pp1s20 --------------------------------MCWLVQAQPTFEYSGKLAAETNKVRGVT
                                                :.   : :*:** ***** ***: **:*

AT3G20550.1     LLFNEPPEARKPSERWRLYVFKDGEPLNEPLCLHRQSCYLFGRERRIADIPTDHPSCSKQ
pp020826_Pp1s20 LAFTEPPEARKPSMRWRLYVFKDGEPMNEPLYIHRQTCYLFGRERKVADVPTDHPSCSKQ
                * *.********* ************:**** :***:********::**:**********

AT3G20550.1     HAVIQYREMEKEKPDGMMGKQVK-----------PYIMDLGSTNKTYINESPIEPQRYYE
pp020826_Pp1s20 HAVIQYRLTEIEGPDGMMESKVRCTQSAWFSVRQPYIMDLGSTNGTHLNNTRIESRRYYE
                *******  * * ***** .:*:           ********** *::*:: **.:****

AT3G20550.1     LFEKDTIKFGNS-----------------------SREYVLLHENSAE--
pp020826_Pp1s20 LREKDTLKFGNSRFIQGTSWVAQHLPMSNFEVETCSREYVLLHENSAAAS
                * ****:*****                       ************
BoxShade v3.31 C (beta, 970507) Output
AT3G20550.1     M A P S S R S P S P R T K R L R R A R G E K E I G R S R E R E D D G R E R E K R N S R E R D R D I G R D R D R E R K G E
pp020826_Pp1s20    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G20550.1     G E R D R E V G D K R R R S G R E D T E K R R R T R T D D E R Y S R G R H E R S T S P S D R S H R S S R R S P E R A I A
pp020826_Pp1s20    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G20550.1     S R H D E G S N A R G G S E E P N V E E D S V A R M R A V E E A L A A K K K E E P S F E L S G K L A E E T N R Y R G I T
pp020826_Pp1s20    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M C W L V Q A Q P T F E Y S G K L A A E T N K V R G V T
 
AT3G20550.1     L L F N E P P E A R K P S E R W R L Y V F K D G E P L N E P L C L H R Q S C Y L F G R E R R I A D I P T D H P S C S K Q
pp020826_Pp1s20    L A F T E P P E A R K P S M R W R L Y V F K D G E P M N E P L Y I H R Q T C Y L F G R E R K V A D V P T D H P S C S K Q
 
AT3G20550.1     H A V I Q Y R E M E K E K P D G M M G K Q V K - - - - - - - - - - - P Y I M D L G S T N K T Y I N E S P I E P Q R Y Y E
pp020826_Pp1s20    H A V I Q Y R L T E I E G P D G M M E S K V R C T Q S A W F S V R Q P Y I M D L G S T N G T H L N N T R I E S R R Y Y E
 
AT3G20550.1     L F E K D T I K F G N S - - - - - - - - - - - - - - - - - - - - - - - S R E Y V L L H E N S A E - -
pp020826_Pp1s20    L R E K D T L K F G N S R F I Q G T S W V A Q H L P M S N F E V E T C S R E Y V L L H E N S A A A S
 
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