Input
| Putative repression domain
|
|
AT3G20550.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt025583 |
not found in 169aa |
AT3G20550.1 |
1st_1st |
0.564432989 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G20550.1 MAPSSRSPSPRTKRLRRARGEKEIGRSREREDDGREREKRNSRERDRDIGRDRDRERKGE
pt025583_POPTR_ ------------------------------------------------------------
AT3G20550.1 GERDREVGDKRRRSGREDTEKRRRTRTDDERYSRGRHERSTSPSDRSHRSSRRSPERAIA
pt025583_POPTR_ ------------------------------------------------------------
AT3G20550.1 SRHDEGSNARGGSEEPNVEEDSVARMRAVEEALAAKKKEEPSFELSGKLAEETNRYRGIT
pt025583_POPTR_ -------------------------MKAAEEALEAKQKKQSSFELSGKLAAETNRVRGIT
*:*.**** **:*::.********* **** ****
AT3G20550.1 LLFNEPPEARKPSERWRLYVFKDGEPLNEPLCLHRQSCYLFGRERRIADIPTDHPSCSKQ
pt025583_POPTR_ FLFIKPPYAKKPDIRWRLYVFKGGEALNEPLYIHRQSCYLFWRERRVVDIPTDHPSRSKK
:** :** *:**. ********.**.***** :******** ****:.******** **:
AT3G20550.1 HAVIQYREMEKEKPDGMMGKQV-KPYIMDLGSTNKTYINESPIEPQRYYELFEKDTIKFG
pt025583_POPTR_ HAVIQFQIYHISMSNFVFSTFIDRPYMMDLGSTNKTFINDNPIEPQRYYELFEKDAIKFG
*****:: . . .: ::.. : :**:*********:**:.**************:****
AT3G20550.1 NSSREYVLLHENSAE
pt025583_POPTR_ SSCREYVQLHENSA-
.*.**** ******
BoxShade v3.31 C (beta, 970507) Output
AT3G20550.1 |
M |
A |
P |
S |
S |
R |
S |
P |
S |
P |
R |
T |
K |
R |
L |
R |
R |
A |
R |
G |
E |
K |
E |
I |
G |
R |
S |
R |
E |
R |
E |
D |
D |
G |
R |
E |
R |
E |
K |
R |
N |
S |
R |
E |
R |
D |
R |
D |
I |
G |
R |
D |
R |
D |
R |
E |
R |
K |
G |
E |
pt025583_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT3G20550.1 |
G |
E |
R |
D |
R |
E |
V |
G |
D |
K |
R |
R |
R |
S |
G |
R |
E |
D |
T |
E |
K |
R |
R |
R |
T |
R |
T |
D |
D |
E |
R |
Y |
S |
R |
G |
R |
H |
E |
R |
S |
T |
S |
P |
S |
D |
R |
S |
H |
R |
S |
S |
R |
R |
S |
P |
E |
R |
A |
I |
A |
pt025583_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT3G20550.1 |
S |
R |
H |
D |
E |
G |
S |
N |
A |
R |
G |
G |
S |
E |
E |
P |
N |
V |
E |
E |
D |
S |
V |
A |
R |
M |
R |
A |
V |
E |
E |
A |
L |
A |
A |
K |
K |
K |
E |
E |
P |
S |
F |
E |
L |
S |
G |
K |
L |
A |
E |
E |
T |
N |
R |
Y |
R |
G |
I |
T |
pt025583_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
K |
A |
A |
E |
E |
A |
L |
E |
A |
K |
Q |
K |
K |
Q |
S |
S |
F |
E |
L |
S |
G |
K |
L |
A |
A |
E |
T |
N |
R |
V |
R |
G |
I |
T |
|
AT3G20550.1 |
L |
L |
F |
N |
E |
P |
P |
E |
A |
R |
K |
P |
S |
E |
R |
W |
R |
L |
Y |
V |
F |
K |
D |
G |
E |
P |
L |
N |
E |
P |
L |
C |
L |
H |
R |
Q |
S |
C |
Y |
L |
F |
G |
R |
E |
R |
R |
I |
A |
D |
I |
P |
T |
D |
H |
P |
S |
C |
S |
K |
Q |
pt025583_POPTR_ |
F |
L |
F |
I |
K |
P |
P |
Y |
A |
K |
K |
P |
D |
I |
R |
W |
R |
L |
Y |
V |
F |
K |
G |
G |
E |
A |
L |
N |
E |
P |
L |
Y |
I |
H |
R |
Q |
S |
C |
Y |
L |
F |
W |
R |
E |
R |
R |
V |
V |
D |
I |
P |
T |
D |
H |
P |
S |
R |
S |
K |
K |
|
AT3G20550.1 |
H |
A |
V |
I |
Q |
Y |
R |
E |
M |
E |
K |
E |
K |
P |
D |
G |
M |
M |
G |
K |
Q |
V |
- |
K |
P |
Y |
I |
M |
D |
L |
G |
S |
T |
N |
K |
T |
Y |
I |
N |
E |
S |
P |
I |
E |
P |
Q |
R |
Y |
Y |
E |
L |
F |
E |
K |
D |
T |
I |
K |
F |
G |
pt025583_POPTR_ |
H |
A |
V |
I |
Q |
F |
Q |
I |
Y |
H |
I |
S |
M |
S |
N |
F |
V |
F |
S |
T |
F |
I |
D |
R |
P |
Y |
M |
M |
D |
L |
G |
S |
T |
N |
K |
T |
F |
I |
N |
D |
N |
P |
I |
E |
P |
Q |
R |
Y |
Y |
E |
L |
F |
E |
K |
D |
A |
I |
K |
F |
G |
|
AT3G20550.1 |
N |
S |
S |
R |
E |
Y |
V |
L |
L |
H |
E |
N |
S |
A |
E |
pt025583_POPTR_ |
S |
S |
C |
R |
E |
Y |
V |
Q |
L |
H |
E |
N |
S |
A |
- |
|
|