fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G20550.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025583 not found in 169aa AT3G20550.1 1st_1st 0.564432989 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G20550.1     MAPSSRSPSPRTKRLRRARGEKEIGRSREREDDGREREKRNSRERDRDIGRDRDRERKGE
pt025583_POPTR_ ------------------------------------------------------------
                                                                            

AT3G20550.1     GERDREVGDKRRRSGREDTEKRRRTRTDDERYSRGRHERSTSPSDRSHRSSRRSPERAIA
pt025583_POPTR_ ------------------------------------------------------------
                                                                            

AT3G20550.1     SRHDEGSNARGGSEEPNVEEDSVARMRAVEEALAAKKKEEPSFELSGKLAEETNRYRGIT
pt025583_POPTR_ -------------------------MKAAEEALEAKQKKQSSFELSGKLAAETNRVRGIT
                                         *:*.**** **:*::.********* **** ****

AT3G20550.1     LLFNEPPEARKPSERWRLYVFKDGEPLNEPLCLHRQSCYLFGRERRIADIPTDHPSCSKQ
pt025583_POPTR_ FLFIKPPYAKKPDIRWRLYVFKGGEALNEPLYIHRQSCYLFWRERRVVDIPTDHPSRSKK
                :** :** *:**. ********.**.***** :******** ****:.******** **:

AT3G20550.1     HAVIQYREMEKEKPDGMMGKQV-KPYIMDLGSTNKTYINESPIEPQRYYELFEKDTIKFG
pt025583_POPTR_ HAVIQFQIYHISMSNFVFSTFIDRPYMMDLGSTNKTFINDNPIEPQRYYELFEKDAIKFG
                *****::  . . .: ::.. : :**:*********:**:.**************:****

AT3G20550.1     NSSREYVLLHENSAE
pt025583_POPTR_ SSCREYVQLHENSA-
                .*.**** ******
BoxShade v3.31 C (beta, 970507) Output
AT3G20550.1     M A P S S R S P S P R T K R L R R A R G E K E I G R S R E R E D D G R E R E K R N S R E R D R D I G R D R D R E R K G E
pt025583_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G20550.1     G E R D R E V G D K R R R S G R E D T E K R R R T R T D D E R Y S R G R H E R S T S P S D R S H R S S R R S P E R A I A
pt025583_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G20550.1     S R H D E G S N A R G G S E E P N V E E D S V A R M R A V E E A L A A K K K E E P S F E L S G K L A E E T N R Y R G I T
pt025583_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - M K A A E E A L E A K Q K K Q S S F E L S G K L A A E T N R V R G I T
 
AT3G20550.1     L L F N E P P E A R K P S E R W R L Y V F K D G E P L N E P L C L H R Q S C Y L F G R E R R I A D I P T D H P S C S K Q
pt025583_POPTR_    F L F I K P P Y A K K P D I R W R L Y V F K G G E A L N E P L Y I H R Q S C Y L F W R E R R V V D I P T D H P S R S K K
 
AT3G20550.1     H A V I Q Y R E M E K E K P D G M M G K Q V - K P Y I M D L G S T N K T Y I N E S P I E P Q R Y Y E L F E K D T I K F G
pt025583_POPTR_    H A V I Q F Q I Y H I S M S N F V F S T F I D R P Y M M D L G S T N K T F I N D N P I E P Q R Y Y E L F E K D A I K F G
 
AT3G20550.1     N S S R E Y V L L H E N S A E
pt025583_POPTR_    S S C R E Y V Q L H E N S A -
 
0