fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G20640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037512 not found in 426aa AT3G20640.1 1st_1st 0.374365482 Ib
Pt025220 KQDLRSLGLCLVPVSS in 419/451 AT3G20640.1 1st_1st 0.389593908 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G20640.1     MGDHHDFINSGSWWKVSSSSSPSSSS-----------------------------SMRAS
gm037512_Glyma1 MADNDQFQASGNWWETARSVRSSMDS----------------------------------
pt025220_POPTR_ MADE---YTSTNWWDSSSSSRNRFDSTGSSSTTSGHTSLGSFAWPTEMVDVKGRSSMETV
                *.*.     * .**. : *     .*                                  

AT3G20640.1     SIESGGSAVFHD----KLH--HHSLATDHHLQMIGLGLSSQSPVDQWNQS-LLRGDSKAE
gm037512_Glyma1 -----SSVVFHDTQNNKLQQPDSATSTDPNLHMMGLGLSSQT-MD-WNQASLLRGEKGTE
pt025220_POPTR_ SV-SDSSVVFHDSQ--KLQQGHDSSA---DLHMMGLGLSSPA-ID-WNQA-LLRGDK-SE
                     .*.****    **:  . : :   .*:*:****** : :* ***: ****:. :*

AT3G20640.1     TSFGVMLQENLNLDATSNANANTTSSTSSYQLQESDSSHHHQALWR------------DP
gm037512_Glyma1 NSFRSMLQENL------------SSSRTNFQQETGNMGLSQQVQWR-SEKMF---SSESS
pt025220_POPTR_ NSFRSMLQDNL------------SSS-TNYQQETG-IG-SSQAQWRSSERVFAGVSGDSS
                .**  ***:**            :** :.:* : .  .   *. **            ..

AT3G20640.1     QSDFKPQILTSGGNRGFFLDH-QFSPHGSSSTDSSTVTCQG-----FAVDNSSNAMYAAT
gm037512_Glyma1 TNEFK-QVNNRGG-GGFSLDQSQFSPQYSSG--DSTVTSQGLPSSNFQID--SSALYGTP
pt025220_POPTR_ MNEFK-QMNR-----GFSLDQPQFSPHGSSS--DSTVTGQGLQSS-FPMD--SSGIYGSP
                 .:** *:       ** **: ****: **.  .**** **     * :*  *..:*.:.

AT3G20640.1     TTTPNSSSGMFHHQQAGGFGSSDQQPSRNHQQSSLGY--SQFGSSTGNYDQMASALPSTW
gm037512_Glyma1 S-ILQGLLGPDHNNQP-------QQ----QQPMSFPYQTTSYGLNSNELVPSWSKVPQ--
pt025220_POPTR_ STMLQGLLGSD--NQV-------QQSSFDNRSMGYAY-GANYGVSTNELLPSWSKIPQ--
                :   :.  *    :*        **    ::  .  *  :.:* .:.:     * :*.  

AT3G20640.1     FLRSSPPPK-PHSPLRFSNNATFWNPAAAGNAGAPPPHDASSNFFPALQPPQIHPQSFDE
gm037512_Glyma1 FLRASPPKQPPNNQLHFTNNATFWNDSEAANN-----KDVRPSFFPSLQPPFSTP-NFEV
pt025220_POPTR_ FLRNSPPKQPPHNQLHLSNNAPFWNASSSAMS------DVRPSFFPSMQPQFTTS-NFDE
                *** *** : *:. *:::***.*** : :.        *. ..***::**    . .*: 

AT3G20640.1     QPKNISEIRDSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFK-RKEKMGDRIAALQQLVS
gm037512_Glyma1 QSKNISEVRESGT-VVKKSGN--EPAPKRTRNESPSPLPAFKVRKEKMGDRITALQQLVS
pt025220_POPTR_ KPKNISEVRDSNT-AVKKSGG--EAGAKRPRNETPSPSPAFKARKEKMGDRITALQQLVS
                :.*****:*:*.:  **:.*.  :...**.:.*:.** **** *********:*******

AT3G20640.1     PFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHSTELEVSEEPDLRS
gm037512_Glyma1 PFGKTDTASVLSEAIEYIKFLHEQVTALSTPYMKSGAPMQIQQNSGKSKEAEGPKQDLRS
pt025220_POPTR_ PFGKTDTASVLSEAIEYIKFLHEQVTVLCTPYMKNGAPIHHQQSSEKSRDSEGQKQDLRS
                ******:***************:**:.*..****.**.:: **.. .:.   . : ****

AT3G20640.1     RGLCLVPVSSTFPVTHDTTVDFWTPTFGGTFR
gm037512_Glyma1 RGLCLVPVSSTFPVTHETTVDFWTPTFGGTSR
pt025220_POPTR_ LGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR
                 ***************:************* *
BoxShade v3.31 C (beta, 970507) Output
AT3G20640.1     M G D H H D F I N S G S W W K V S S S S S P S S S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S M R A S
gm037512_Glyma1    M A D N D Q F Q A S G N W W E T A R S V R S S M D S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt025220_POPTR_    M A D E - - - Y T S T N W W D S S S S S R N R F D S T G S S S T T S G H T S L G S F A W P T E M V D V K G R S S M E T V
 
AT3G20640.1     S I E S G G S A V F H D - - - - K L H - - H H S L A T D H H L Q M I G L G L S S Q S P V D Q W N Q S - L L R G D S K A E
gm037512_Glyma1    - - - - - S S V V F H D T Q N N K L Q Q P D S A T S T D P N L H M M G L G L S S Q T - M D - W N Q A S L L R G E K G T E
pt025220_POPTR_    S V - S D S S V V F H D S Q - - K L Q Q G H D S S A - - - D L H M M G L G L S S P A - I D - W N Q A - L L R G D K - S E
 
AT3G20640.1     T S F G V M L Q E N L N L D A T S N A N A N T T S S T S S Y Q L Q E S D S S H H H Q A L W R - - - - - - - - - - - - D P
gm037512_Glyma1    N S F R S M L Q E N L - - - - - - - - - - - - S S S R T N F Q Q E T G N M G L S Q Q V Q W R - S E K M F - - - S S E S S
pt025220_POPTR_    N S F R S M L Q D N L - - - - - - - - - - - - S S S - T N Y Q Q E T G - I G - S S Q A Q W R S S E R V F A G V S G D S S
 
AT3G20640.1     Q S D F K P Q I L T S G G N R G F F L D H - Q F S P H G S S S T D S S T V T C Q G - - - - - F A V D N S S N A M Y A A T
gm037512_Glyma1    T N E F K - Q V N N R G G - G G F S L D Q S Q F S P Q Y S S G - - D S T V T S Q G L P S S N F Q I D - - S S A L Y G T P
pt025220_POPTR_    M N E F K - Q M N R - - - - - G F S L D Q P Q F S P H G S S S - - D S T V T G Q G L Q S S - F P M D - - S S G I Y G S P
 
AT3G20640.1     T T T P N S S S G M F H H Q Q A G G F G S S D Q Q P S R N H Q Q S S L G Y - - S Q F G S S T G N Y D Q M A S A L P S T W
gm037512_Glyma1    S - I L Q G L L G P D H N N Q P - - - - - - - Q Q - - - - Q Q P M S F P Y Q T T S Y G L N S N E L V P S W S K V P Q - -
pt025220_POPTR_    S T M L Q G L L G S D - - N Q V - - - - - - - Q Q S S F D N R S M G Y A Y - G A N Y G V S T N E L L P S W S K I P Q - -
 
AT3G20640.1     F L R S S P P P K - P H S P L R F S N N A T F W N P A A A G N A G A P P P H D A S S N F F P A L Q P P Q I H P Q S F D E
gm037512_Glyma1    F L R A S P P K Q P P N N Q L H F T N N A T F W N D S E A A N N - - - - - K D V R P S F F P S L Q P P F S T P - N F E V
pt025220_POPTR_    F L R N S P P K Q P P H N Q L H L S N N A P F W N A S S S A M S - - - - - - D V R P S F F P S M Q P Q F T T S - N F D E
 
AT3G20640.1     Q P K N I S E I R D S S S N E V K R G G N D H Q P A A K R A K S E A A S P S P A F K - R K E K M G D R I A A L Q Q L V S
gm037512_Glyma1    Q S K N I S E V R E S G T - V V K K S G N - - E P A P K R T R N E S P S P L P A F K V R K E K M G D R I T A L Q Q L V S
pt025220_POPTR_    K P K N I S E V R D S N T - A V K K S G G - - E A G A K R P R N E T P S P S P A F K A R K E K M G D R I T A L Q Q L V S
 
AT3G20640.1     P F G K T D A A S V L S E A I E Y I K F L H Q Q V S A L S N P Y M K S G A S L Q H Q Q S D H S T E L E V S E E P D L R S
gm037512_Glyma1    P F G K T D T A S V L S E A I E Y I K F L H E Q V T A L S T P Y M K S G A P M Q I Q Q N S G K S K E A E G P K Q D L R S
pt025220_POPTR_    P F G K T D T A S V L S E A I E Y I K F L H E Q V T V L C T P Y M K N G A P I H H Q Q S S E K S R D S E G Q K Q D L R S
 
AT3G20640.1     R G L C L V P V S S T F P V T H D T T V D F W T P T F G G T F R
gm037512_Glyma1    R G L C L V P V S S T F P V T H E T T V D F W T P T F G G T S R
pt025220_POPTR_    L G L C L V P V S S T F P V T H E T T V D F W T P T F G G T F R
 
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