fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G20640.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025220 KQDLRSLGLCLVPVSS in 419/451 AT3G20640.1 1st_1st 0.389593908 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G20640.1     MGDHHDFINSGSWWKVSSSS-----SPSSSSSMRA-------------------SSIE--
pt025220_POPTR_ MADEY---TSTNWWDSSSSSRNRFDSTGSSSTTSGHTSLGSFAWPTEMVDVKGRSSMETV
                *.*.:   .* .**. ****     *..***:  .                   **:*  

AT3G20640.1     --SGGSAVFHD--KLHH-HSLATDHHLQMIGLGLSSQSPVDQWNQSLLRGDSKAETSFGV
pt025220_POPTR_ SVSDSSVVFHDSQKLQQGHDSSADLH--MMGLGLS--SPAIDWNQALLRGD-KSENSFRS
                  *..*.****  **:: *. ::* *  *:*****  **. :***:***** *:*.**  

AT3G20640.1     MLQENLNLDATSNANANTTSSTSSYQLQESDSSHHHQALWRDPQ------------SDFK
pt025220_POPTR_ MLQDNL-------------SSSTNYQQETGIGS--SQAQWRSSERVFAGVSGDSSMNEFK
                ***:**             **::.** : . .*   ** **..:            .:**

AT3G20640.1     PQILTSGGNRGFFLDH-QFSPHGSSSTDSSTVTCQGFAVDNSSNAMYAATTTTPNSSSGM
pt025220_POPTR_ QM------NRGFSLDQPQFSPHGSSS--DSTVTGQGL------------QSSFPMDSSGI
                        **** **: *********  .**** **:             :: * .***:

AT3G20640.1     FHHQQA---GGFGSSDQQPSRNHQQSSLGYSQFGSSTGNYDQMASALPSTW-----FLRS
pt025220_POPTR_ YGSPSTMLQGLLGSDNQVQQSSFDNRSMGYA-YGA---NYGVSTNELLPSWSKIPQFLRN
                :   .:   * :**.:*  . ..:: *:**: :*:   **.  :. * .:*     ***.

AT3G20640.1     SPPPK-PHSPLRFSNNATFWNPAAAGNAGAPPPHDASSNFFPALQPPQIHPQSFDEQPKN
pt025220_POPTR_ SPPKQPPHNQLHLSNNAPFWNASSSAMS------DVRPSFFPSMQ-PQFTTSNFDEKPKN
                *** : **. *::****.***.:::. :      *. ..***::* **: ...***:***

AT3G20640.1     ISEIRDSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFK-RKEKMGDRIAALQQLVSPFGK
pt025220_POPTR_ ISEVRDSNTAVKKSGG---EAGAKRPRNETPSPSPAFKARKEKMGDRITALQQLVSPFGK
                ***:***.:   * **   :..***.:.*:.******* *********:***********

AT3G20640.1     TDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHSTELEVSEEPDLRSRGLC
pt025220_POPTR_ TDTASVLSEAIEYIKFLHEQVTVLCTPYMKNGAPIHHQQSSEKSRDSEGQKQDLRSLGLC
                **:***************:**:.*..****.**.::****...:. . .:: **** ***

AT3G20640.1     LVPVSSTFPVTHDTTVDFWTPTFGGTFR
pt025220_POPTR_ LVPVSSTFPVTHETTVDFWTPTFGGTFR
                ************:***************
BoxShade v3.31 C (beta, 970507) Output
AT3G20640.1     M G D H H D F I N S G S W W K V S S S S - - - - - S P S S S S S M R A - - - - - - - - - - - - - - - - - - - S S I E - -
pt025220_POPTR_    M A D E Y - - - T S T N W W D S S S S S R N R F D S T G S S S T T S G H T S L G S F A W P T E M V D V K G R S S M E T V
 
AT3G20640.1     - - S G G S A V F H D - - K L H H - H S L A T D H H L Q M I G L G L S S Q S P V D Q W N Q S L L R G D S K A E T S F G V
pt025220_POPTR_    S V S D S S V V F H D S Q K L Q Q G H D S S A D L H - - M M G L G L S - - S P A I D W N Q A L L R G D - K S E N S F R S
 
AT3G20640.1     M L Q E N L N L D A T S N A N A N T T S S T S S Y Q L Q E S D S S H H H Q A L W R D P Q - - - - - - - - - - - - S D F K
pt025220_POPTR_    M L Q D N L - - - - - - - - - - - - - S S S T N Y Q Q E T G I G S - - S Q A Q W R S S E R V F A G V S G D S S M N E F K
 
AT3G20640.1     P Q I L T S G G N R G F F L D H - Q F S P H G S S S T D S S T V T C Q G F A V D N S S N A M Y A A T T T T P N S S S G M
pt025220_POPTR_    Q M - - - - - - N R G F S L D Q P Q F S P H G S S S - - D S T V T G Q G L - - - - - - - - - - - - Q S S F P M D S S G I
 
AT3G20640.1     F H H Q Q A - - - G G F G S S D Q Q P S R N H Q Q S S L G Y S Q F G S S T G N Y D Q M A S A L P S T W - - - - - F L R S
pt025220_POPTR_    Y G S P S T M L Q G L L G S D N Q V Q Q S S F D N R S M G Y A - Y G A - - - N Y G V S T N E L L P S W S K I P Q F L R N
 
AT3G20640.1     S P P P K - P H S P L R F S N N A T F W N P A A A G N A G A P P P H D A S S N F F P A L Q P P Q I H P Q S F D E Q P K N
pt025220_POPTR_    S P P K Q P P H N Q L H L S N N A P F W N A S S S A M S - - - - - - D V R P S F F P S M Q - P Q F T T S N F D E K P K N
 
AT3G20640.1     I S E I R D S S S N E V K R G G N D H Q P A A K R A K S E A A S P S P A F K - R K E K M G D R I A A L Q Q L V S P F G K
pt025220_POPTR_    I S E V R D S N T A V K K S G G - - - E A G A K R P R N E T P S P S P A F K A R K E K M G D R I T A L Q Q L V S P F G K
 
AT3G20640.1     T D A A S V L S E A I E Y I K F L H Q Q V S A L S N P Y M K S G A S L Q H Q Q S D H S T E L E V S E E P D L R S R G L C
pt025220_POPTR_    T D T A S V L S E A I E Y I K F L H E Q V T V L C T P Y M K N G A P I H H Q Q S S E K S R D S E G Q K Q D L R S L G L C
 
AT3G20640.1     L V P V S S T F P V T H D T T V D F W T P T F G G T F R
pt025220_POPTR_    L V P V S S T F P V T H E T T V D F W T P T F G G T F R
 
0