fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G20840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm032854 not found in 553aa AT1G51190.1 1st_not 0.584984358 II
Pt030641 not found in 545aa AT1G51190.1 1st_not 0.614181438 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G20840.1     MNSNNWLGFPLSPNNSSLPPH--------EYNLGLVSDHMDNPFQTQEWNMINPHGGGGD
gm032854_Glyma1 MN-NNWLSFPLSPTHSSLPAHDLQATQYHQFSLGLVNENMDNPFQNHDWNLINTHS----
pt030641_POPTR_ MNSNNWLSFPLSPTHPTLPAH-LHASHPHQFSLGLVNDNMENPFQTQEWSLLNTQG----
                ** ****.*****.:.:**.*        ::.****.::*:****.::*.::*.:.    

AT3G20840.1     EGGEVPKVADFLGVSKPDENQSNHLVAYN-----DSDYYFHTNSLMPSVQSNDVVVAACD
gm032854_Glyma1 -SNEIPKVADFLGVSK-SENQSD-LAALNEIHSNDSDYLFTNNSLVP--MQNPVL-----
pt030641_POPTR_ -NNEVPKVADFLGVSK-SENQSD-LVAFNEIQASDSEYLFSSNSLLP--VQNAVV-----
                 ..*:*********** .****: *.* *     **:* * .***:*   .* *:     

AT3G20840.1     SNTPNNSSYHELQESA-HNLQSLTLSMGTTAGNNVVDKASPSETTGDNASGGALAVVETA
gm032854_Glyma1 -DTPSN----EYQENANSNLQSLTLSMG--SG-----KDSTCETSGENSTN----TTVEV
pt030641_POPTR_ -AASTN---YEFQENP-SNLQSLTLSMGSASG-----KGSKCETSGDNITN----SVEAA
                  :..*    * **..  **********  :*     * * .**:*:* :.     .  .

AT3G20840.1     TPRRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKA
gm032854_Glyma1 APRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKA
pt030641_POPTR_ APRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKA
                :***:****************************************************:**

AT3G20840.1     ARSYDLAALKYWGPSTTTNFPITNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRG
gm032854_Glyma1 ARAYDLAALKYWGTSTTTNFPISNYEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRG
pt030641_POPTR_ ARAYDLAALKYWGTSTTTNFPISNYEKELEDMKNMTRQEFVASIRRKSSGFSRGASMYRG
                **:**********.********:*****:::**:********:*****************

AT3G20840.1     VTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYD
gm032854_Glyma1 VTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYD
pt030641_POPTR_ VTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMNRYD
                ******************************************************::.***

AT3G20840.1     VKAILESSTLPIGGGAAKRLKEAQALESSRKREAEMIALGSS--FQYGGGSSTGSGSTSS
gm032854_Glyma1 VKAILESNTLPIGGGAAKRLKEAQALESSRKRE-EMIALGSSSTFQY--------GTSAS
pt030641_POPTR_ VKSILESNSLPIGGGAAKRLKEAQAIESSQKRE-EMIALGSS--YPY--------GSTSS
                **:****.:****************:***:*** ********  : *        *:::*

AT3G20840.1     RLQLQPYPL-----SIQQPLEPFLSLQNNDISHYNNNNAHDSSSFNHHSYIQTQLHLHQQ
gm032854_Glyma1 SSRLHAYPLMQHHHQFEQP-QPLLTLQNHDISS--SHFSHQQDPLHHQGYIQTQLQLHQQ
pt030641_POPTR_ SSRQQAYSLMQ--KPFEQP-QPLLTLQNQDIS------QYTQDSSFQQNYLQTQLHLHQL
                  : :.*.*      ::** :*:*:***:***       : ...  ::.*:****:*** 

AT3G20840.1     T--NNYLQQQSSQNSQQLYNAYLHSNPALLHGL-------VSTSIVDNNNNNGGSSGSYN
gm032854_Glyma1 SGASSYSFQN----NAQFYNGYLQNHPALLQGMMNMGSSSSSSSVLENNNSN---NNNNN
pt030641_POPTR_ SAGSNFLHNNQSSQNPQYYNSYIQNNPTLLHGLWNMG---SSSSLMENNGSS---SGSYS
                :  ..:  ::    . * **.*::.:*:**:*:        *:*:::**...   ... .

AT3G20840.1     TAAFLGNHGIGIGSSST----VGSTEEFPTVKTDYDMPSSDGTGGYSGWT-SESVQGSNP
gm032854_Glyma1 VGGFVGS-GFGMASNATAGNTVGTAEELGLVKVDYDMPA----GGYGGWSAADSMQTSNG
pt030641_POPTR_ TVGYLGN-GLGMATNSTGSNAV--AEELPLVKIDYDMPS----GGYGSWS-GESVQGSNP
                . .::*. *:*:.:.:*    *  :**:  ** *****:    ***..*: .:*:* ** 

AT3G20840.1     GGVFTMWNE
gm032854_Glyma1 -GVFTMWND
pt030641_POPTR_ -GVFTMWNE
                 *******:
BoxShade v3.31 C (beta, 970507) Output
AT3G20840.1     M N S N N W L G F P L S P N N S S L P P H - - - - - - - - E Y N L G L V S D H M D N P F Q T Q E W N M I N P H G G G G D
gm032854_Glyma1    M N - N N W L S F P L S P T H S S L P A H D L Q A T Q Y H Q F S L G L V N E N M D N P F Q N H D W N L I N T H S - - - -
pt030641_POPTR_    M N S N N W L S F P L S P T H P T L P A H - L H A S H P H Q F S L G L V N D N M E N P F Q T Q E W S L L N T Q G - - - -
 
AT3G20840.1     E G G E V P K V A D F L G V S K P D E N Q S N H L V A Y N - - - - - D S D Y Y F H T N S L M P S V Q S N D V V V A A C D
gm032854_Glyma1    - S N E I P K V A D F L G V S K - S E N Q S D - L A A L N E I H S N D S D Y L F T N N S L V P - - M Q N P V L - - - - -
pt030641_POPTR_    - N N E V P K V A D F L G V S K - S E N Q S D - L V A F N E I Q A S D S E Y L F S S N S L L P - - V Q N A V V - - - - -
 
AT3G20840.1     S N T P N N S S Y H E L Q E S A - H N L Q S L T L S M G T T A G N N V V D K A S P S E T T G D N A S G G A L A V V E T A
gm032854_Glyma1    - D T P S N - - - - E Y Q E N A N S N L Q S L T L S M G - - S G - - - - - K D S T C E T S G E N S T N - - - - T T V E V
pt030641_POPTR_    - A A S T N - - - Y E F Q E N P - S N L Q S L T L S M G S A S G - - - - - K G S K C E T S G D N I T N - - - - S V E A A
 
AT3G20840.1     T P R R A L D T F G Q R T S I Y R G V T R H R W T G R Y E A H L W D N S C R R E G Q S R K G R Q V Y L G G Y D K E D K A
gm032854_Glyma1    A P R R T L D T F G Q R T S I Y R G V T R H R W T G R Y E A H L W D N S C R R E G Q S R K G R Q V Y L G G Y D K E E K A
pt030641_POPTR_    A P R R T L D T F G Q R T S I Y R G V T R H R W T G R Y E A H L W D N S C R R E G Q S R K G R Q V Y L G G Y D K E D K A
 
AT3G20840.1     A R S Y D L A A L K Y W G P S T T T N F P I T N Y E K E V E E M K H M T R Q E F V A A I R R K S S G F S R G A S M Y R G
gm032854_Glyma1    A R A Y D L A A L K Y W G T S T T T N F P I S N Y E K E L D E M K H M T R Q E F V A A I R R K S S G F S R G A S M Y R G
pt030641_POPTR_    A R A Y D L A A L K Y W G T S T T T N F P I S N Y E K E L E D M K N M T R Q E F V A S I R R K S S G F S R G A S M Y R G
 
AT3G20840.1     V T R H H Q H G R W Q A R I G R V A G N K D L Y L G T F S T E E E A A E A Y D I A A I K F R G L N A V T N F E I N R Y D
gm032854_Glyma1    V T R H H Q H G R W Q A R I G R V A G N K D L Y L G T F S T E E E A A E A Y D I A A I K F R G L N A V T N F D M S R Y D
pt030641_POPTR_    V T R H H Q H G R W Q A R I G R V A G N K D L Y L G T F S T E E E A A E A Y D I A A I K F R G L N A V T N F D M N R Y D
 
AT3G20840.1     V K A I L E S S T L P I G G G A A K R L K E A Q A L E S S R K R E A E M I A L G S S - - F Q Y G G G S S T G S G S T S S
gm032854_Glyma1    V K A I L E S N T L P I G G G A A K R L K E A Q A L E S S R K R E - E M I A L G S S S T F Q Y - - - - - - - - G T S A S
pt030641_POPTR_    V K S I L E S N S L P I G G G A A K R L K E A Q A I E S S Q K R E - E M I A L G S S - - Y P Y - - - - - - - - G S T S S
 
AT3G20840.1     R L Q L Q P Y P L - - - - - S I Q Q P L E P F L S L Q N N D I S H Y N N N N A H D S S S F N H H S Y I Q T Q L H L H Q Q
gm032854_Glyma1    S S R L H A Y P L M Q H H H Q F E Q P - Q P L L T L Q N H D I S S - - S H F S H Q Q D P L H H Q G Y I Q T Q L Q L H Q Q
pt030641_POPTR_    S S R Q Q A Y S L M Q - - K P F E Q P - Q P L L T L Q N Q D I S - - - - - - Q Y T Q D S S F Q Q N Y L Q T Q L H L H Q L
 
AT3G20840.1     T - - N N Y L Q Q Q S S Q N S Q Q L Y N A Y L H S N P A L L H G L - - - - - - - V S T S I V D N N N N N G G S S G S Y N
gm032854_Glyma1    S G A S S Y S F Q N - - - - N A Q F Y N G Y L Q N H P A L L Q G M M N M G S S S S S S S V L E N N N S N - - - N N N N N
pt030641_POPTR_    S A G S N F L H N N Q S S Q N P Q Y Y N S Y I Q N N P T L L H G L W N M G - - - S S S S L M E N N G S S - - - S G S Y S
 
AT3G20840.1     T A A F L G N H G I G I G S S S T - - - - V G S T E E F P T V K T D Y D M P S S D G T G G Y S G W T - S E S V Q G S N P
gm032854_Glyma1    V G G F V G S - G F G M A S N A T A G N T V G T A E E L G L V K V D Y D M P A - - - - G G Y G G W S A A D S M Q T S N G
pt030641_POPTR_    T V G Y L G N - G L G M A T N S T G S N A V - - A E E L P L V K I D Y D M P S - - - - G G Y G S W S - G E S V Q G S N P
 
AT3G20840.1     G G V F T M W N E
gm032854_Glyma1    - G V F T M W N D
pt030641_POPTR_    - G V F T M W N E
 
0