Input
| Putative repression domain
|
|
AT3G20840.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt011685 |
not found in 524aa |
AT1G51190.1 |
not_not |
0.604796663 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G20840.1 MNSNNWLGFPLSPNNSSLP-------PHEYNLGLVSDHMDNPFQTQEWNMINPHGGGGDE
pt011685_POPTR_ MNSNNWLSFPLSPTHPSLPAHLHASHPHQFSLGLVNDNMENPFQTQEWSLLNTHQG----
*******.*****.:.*** **::.****.*:*:********.::*.* *
AT3G20840.1 GGEVPKVADFLGVSKPDENQSNHLVAY-----NDSDYYFHTNSLMPSVQSNDVVVAACDS
pt011685_POPTR_ NNEVPKVADFLGVSK-SENQSD-LVAFNEIQANESDYLFSNNSLVP-VQ--NAVVGA---
..************* .****: ***: *:*** * .***:* ** :.**.*
AT3G20840.1 NTPNNSSYHELQESAHNLQSLTLSMGTTAGNNVVDKASPSETTGDNASGGALAVVETATP
pt011685_POPTR_ ---NNT--FEFQENASNLQSLTLSMGSASG-----KGSTCEPSGDNSTN----TVEAAAP
**: .*:**.* **********:::* *.*..*.:***::. .**:*:*
AT3G20840.1 RRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAAR
pt011685_POPTR_ RRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ---GGYDKEEKAAR
**:******************************************* ******:****
AT3G20840.1 SYDLAALKYWGPSTTTNFPITNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVT
pt011685_POPTR_ AYDLAALKYWGTSTTTNFPISNYEKEIEEMKHMTRQEFVASIRRKSSGFSRGASMYRGVT
:**********.********:*****:*************:*******************
AT3G20840.1 RHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVK
pt011685_POPTR_ RHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVK
****************************************************::******
AT3G20840.1 AILESSTLPIGGGAAKRLKEAQALESSRKREAEMIALGSSFQYGGGSSTGSGSTSSRLQL
pt011685_POPTR_ SILESNTLPIGGGAAKRLKEAQAIESSRKRE-EMIALGSSFPY--------GSTSSSSRL
:****.*****************:******* ********* * ***** :*
AT3G20840.1 QPYPLSIQQPLE---PFLSLQNNDISHYNNNNAHDSSSFNHHSYIQTQLHLHQQT--NNY
pt011685_POPTR_ QAYPL-MQTPFEQPQPLLTLQNQDISQY----TQDSSSF-HQNFLQTQLHLHQQSTGSNF
*.*** :* *:* *:*:***:***:* ::***** *:.::*********: .*:
AT3G20840.1 LQQQSSQNSQQLYNAYLHSNPALLHGLVSTSIVDNNNNNGGSSGSYNTAAFLGNHGIGIG
pt011685_POPTR_ LHNQSNQNP-QYYNSYIQNNPALLHGF--------------------TGGYLGN-GLGMA
*::**.**. * **:*::.*******: *..:*** *:*:.
AT3G20840.1 SSST----VGSTEEFPTVKTDYDMPSSDGTGGYSGWTSESVQGSNPGGVFTMWNE
pt011685_POPTR_ SNSTGSNAVGSAEELALVKVDYDMPSS----GYGSWSGDSVQGSNP-GVFTMWNE
*.** ***:**:. **.******* **..*:.:******* ********
BoxShade v3.31 C (beta, 970507) Output
AT3G20840.1 |
M |
N |
S |
N |
N |
W |
L |
G |
F |
P |
L |
S |
P |
N |
N |
S |
S |
L |
P |
- |
- |
- |
- |
- |
- |
- |
P |
H |
E |
Y |
N |
L |
G |
L |
V |
S |
D |
H |
M |
D |
N |
P |
F |
Q |
T |
Q |
E |
W |
N |
M |
I |
N |
P |
H |
G |
G |
G |
G |
D |
E |
pt011685_POPTR_ |
M |
N |
S |
N |
N |
W |
L |
S |
F |
P |
L |
S |
P |
T |
H |
P |
S |
L |
P |
A |
H |
L |
H |
A |
S |
H |
P |
H |
Q |
F |
S |
L |
G |
L |
V |
N |
D |
N |
M |
E |
N |
P |
F |
Q |
T |
Q |
E |
W |
S |
L |
L |
N |
T |
H |
Q |
G |
- |
- |
- |
- |
|
AT3G20840.1 |
G |
G |
E |
V |
P |
K |
V |
A |
D |
F |
L |
G |
V |
S |
K |
P |
D |
E |
N |
Q |
S |
N |
H |
L |
V |
A |
Y |
- |
- |
- |
- |
- |
N |
D |
S |
D |
Y |
Y |
F |
H |
T |
N |
S |
L |
M |
P |
S |
V |
Q |
S |
N |
D |
V |
V |
V |
A |
A |
C |
D |
S |
pt011685_POPTR_ |
N |
N |
E |
V |
P |
K |
V |
A |
D |
F |
L |
G |
V |
S |
K |
- |
S |
E |
N |
Q |
S |
D |
- |
L |
V |
A |
F |
N |
E |
I |
Q |
A |
N |
E |
S |
D |
Y |
L |
F |
S |
N |
N |
S |
L |
V |
P |
- |
V |
Q |
- |
- |
N |
A |
V |
V |
G |
A |
- |
- |
- |
|
AT3G20840.1 |
N |
T |
P |
N |
N |
S |
S |
Y |
H |
E |
L |
Q |
E |
S |
A |
H |
N |
L |
Q |
S |
L |
T |
L |
S |
M |
G |
T |
T |
A |
G |
N |
N |
V |
V |
D |
K |
A |
S |
P |
S |
E |
T |
T |
G |
D |
N |
A |
S |
G |
G |
A |
L |
A |
V |
V |
E |
T |
A |
T |
P |
pt011685_POPTR_ |
- |
- |
- |
N |
N |
T |
- |
- |
F |
E |
F |
Q |
E |
N |
A |
S |
N |
L |
Q |
S |
L |
T |
L |
S |
M |
G |
S |
A |
S |
G |
- |
- |
- |
- |
- |
K |
G |
S |
T |
C |
E |
P |
S |
G |
D |
N |
S |
T |
N |
- |
- |
- |
- |
T |
V |
E |
A |
A |
A |
P |
|
AT3G20840.1 |
R |
R |
A |
L |
D |
T |
F |
G |
Q |
R |
T |
S |
I |
Y |
R |
G |
V |
T |
R |
H |
R |
W |
T |
G |
R |
Y |
E |
A |
H |
L |
W |
D |
N |
S |
C |
R |
R |
E |
G |
Q |
S |
R |
K |
G |
R |
Q |
V |
Y |
L |
G |
G |
Y |
D |
K |
E |
D |
K |
A |
A |
R |
pt011685_POPTR_ |
R |
R |
T |
L |
D |
T |
F |
G |
Q |
R |
T |
S |
I |
Y |
R |
G |
V |
T |
R |
H |
R |
W |
T |
G |
R |
Y |
E |
A |
H |
L |
W |
D |
N |
S |
C |
R |
R |
E |
G |
Q |
S |
R |
K |
G |
R |
Q |
- |
- |
- |
G |
G |
Y |
D |
K |
E |
E |
K |
A |
A |
R |
|
AT3G20840.1 |
S |
Y |
D |
L |
A |
A |
L |
K |
Y |
W |
G |
P |
S |
T |
T |
T |
N |
F |
P |
I |
T |
N |
Y |
E |
K |
E |
V |
E |
E |
M |
K |
H |
M |
T |
R |
Q |
E |
F |
V |
A |
A |
I |
R |
R |
K |
S |
S |
G |
F |
S |
R |
G |
A |
S |
M |
Y |
R |
G |
V |
T |
pt011685_POPTR_ |
A |
Y |
D |
L |
A |
A |
L |
K |
Y |
W |
G |
T |
S |
T |
T |
T |
N |
F |
P |
I |
S |
N |
Y |
E |
K |
E |
I |
E |
E |
M |
K |
H |
M |
T |
R |
Q |
E |
F |
V |
A |
S |
I |
R |
R |
K |
S |
S |
G |
F |
S |
R |
G |
A |
S |
M |
Y |
R |
G |
V |
T |
|
AT3G20840.1 |
R |
H |
H |
Q |
H |
G |
R |
W |
Q |
A |
R |
I |
G |
R |
V |
A |
G |
N |
K |
D |
L |
Y |
L |
G |
T |
F |
S |
T |
E |
E |
E |
A |
A |
E |
A |
Y |
D |
I |
A |
A |
I |
K |
F |
R |
G |
L |
N |
A |
V |
T |
N |
F |
E |
I |
N |
R |
Y |
D |
V |
K |
pt011685_POPTR_ |
R |
H |
H |
Q |
H |
G |
R |
W |
Q |
A |
R |
I |
G |
R |
V |
A |
G |
N |
K |
D |
L |
Y |
L |
G |
T |
F |
S |
T |
E |
E |
E |
A |
A |
E |
A |
Y |
D |
I |
A |
A |
I |
K |
F |
R |
G |
L |
N |
A |
V |
T |
N |
F |
D |
M |
N |
R |
Y |
D |
V |
K |
|
AT3G20840.1 |
A |
I |
L |
E |
S |
S |
T |
L |
P |
I |
G |
G |
G |
A |
A |
K |
R |
L |
K |
E |
A |
Q |
A |
L |
E |
S |
S |
R |
K |
R |
E |
A |
E |
M |
I |
A |
L |
G |
S |
S |
F |
Q |
Y |
G |
G |
G |
S |
S |
T |
G |
S |
G |
S |
T |
S |
S |
R |
L |
Q |
L |
pt011685_POPTR_ |
S |
I |
L |
E |
S |
N |
T |
L |
P |
I |
G |
G |
G |
A |
A |
K |
R |
L |
K |
E |
A |
Q |
A |
I |
E |
S |
S |
R |
K |
R |
E |
- |
E |
M |
I |
A |
L |
G |
S |
S |
F |
P |
Y |
- |
- |
- |
- |
- |
- |
- |
- |
G |
S |
T |
S |
S |
S |
S |
R |
L |
|
AT3G20840.1 |
Q |
P |
Y |
P |
L |
S |
I |
Q |
Q |
P |
L |
E |
- |
- |
- |
P |
F |
L |
S |
L |
Q |
N |
N |
D |
I |
S |
H |
Y |
N |
N |
N |
N |
A |
H |
D |
S |
S |
S |
F |
N |
H |
H |
S |
Y |
I |
Q |
T |
Q |
L |
H |
L |
H |
Q |
Q |
T |
- |
- |
N |
N |
Y |
pt011685_POPTR_ |
Q |
A |
Y |
P |
L |
- |
M |
Q |
T |
P |
F |
E |
Q |
P |
Q |
P |
L |
L |
T |
L |
Q |
N |
Q |
D |
I |
S |
Q |
Y |
- |
- |
- |
- |
T |
Q |
D |
S |
S |
S |
F |
- |
H |
Q |
N |
F |
L |
Q |
T |
Q |
L |
H |
L |
H |
Q |
Q |
S |
T |
G |
S |
N |
F |
|
AT3G20840.1 |
L |
Q |
Q |
Q |
S |
S |
Q |
N |
S |
Q |
Q |
L |
Y |
N |
A |
Y |
L |
H |
S |
N |
P |
A |
L |
L |
H |
G |
L |
V |
S |
T |
S |
I |
V |
D |
N |
N |
N |
N |
N |
G |
G |
S |
S |
G |
S |
Y |
N |
T |
A |
A |
F |
L |
G |
N |
H |
G |
I |
G |
I |
G |
pt011685_POPTR_ |
L |
H |
N |
Q |
S |
N |
Q |
N |
P |
- |
Q |
Y |
Y |
N |
S |
Y |
I |
Q |
N |
N |
P |
A |
L |
L |
H |
G |
F |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
T |
G |
G |
Y |
L |
G |
N |
- |
G |
L |
G |
M |
A |
|
AT3G20840.1 |
S |
S |
S |
T |
- |
- |
- |
- |
V |
G |
S |
T |
E |
E |
F |
P |
T |
V |
K |
T |
D |
Y |
D |
M |
P |
S |
S |
D |
G |
T |
G |
G |
Y |
S |
G |
W |
T |
S |
E |
S |
V |
Q |
G |
S |
N |
P |
G |
G |
V |
F |
T |
M |
W |
N |
E |
pt011685_POPTR_ |
S |
N |
S |
T |
G |
S |
N |
A |
V |
G |
S |
A |
E |
E |
L |
A |
L |
V |
K |
V |
D |
Y |
D |
M |
P |
S |
S |
- |
- |
- |
- |
G |
Y |
G |
S |
W |
S |
G |
D |
S |
V |
Q |
G |
S |
N |
P |
- |
G |
V |
F |
T |
M |
W |
N |
E |
|
|