fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G20840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030807 not found in 562aa AT1G51190.1 not_not 0.574556830 III
Gm030806 not found in 598aa AT1G51190.1 not_not 0.555787278 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G20840.1     MNSNNWLGFPLSPNNSSLPP--------HEYNLGLVSDHMDNPFQTQEWNMINPHGGGGD
gm030806_Glyma1 MN-NNWLSFPLSPTHSSLPAHDLQATQYHQFSLGLVNENMENPFQNHDWSLINTH-----
gm030807_Glyma1 MN-NNWLSFPLSPTHSSLPAHDLQATQYHQFSLGLVNENMENPFQNHDWSLINTH-----
                ** ****.*****.:****.        *::.****.::*:****.::*.:**.*     

AT3G20840.1     EGGEVPKVADFLGVSKPDENQSN-----HLVAYNDSDYYFHTNSLMPSVQSNDVVVAACD
gm030806_Glyma1 SSSEVPKVADFLGVSK-SENESDLAASLNEIQSNDSDYLFTNNSLVP--MQNPAV-----
gm030807_Glyma1 SSSEVPKVADFLGVSK-SENESDLAASLNEIQSNDSDYLFTNNSLVP--MQNPAV-----
                ...************* .**:*:     : :  ***** * .***:*   .* .*     

AT3G20840.1     SNTPNNSSYHELQESAH-NLQSLTLSMGTTAGNNVVDKASPSETTGDNASGGALAVVETA
gm030806_Glyma1 -DTPSN----EYQENANSSLQSLTLSMGS-------GKDSTCETSGDNSTNTTTTTTVEA
gm030807_Glyma1 -DTPSN----EYQENANSSLQSLTLSMGS-------GKDSTCETSGDNSTNTTTTTTVEA
                 :**.*    * **.*: .*********:       .* *..**:***::. : :..  *

AT3G20840.1     TPRRALDTFGQRTSIYRGVT------------------------------------RHRW
gm030806_Glyma1 APRRTLDTFGQRTSIYRGVTRLDCHSMLSLNPIYILYCLICCFCFRSNSAYYMKIYRHRW
gm030807_Glyma1 APRRTLDTFGQRTSIYRGVT------------------------------------RHRW
                :***:***************                                    ****

AT3G20840.1     TGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARSYDLAALKYWGPSTTTNFPITN
gm030806_Glyma1 TGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARSYDLAALKYWGTSTTTNFPISN
gm030807_Glyma1 TGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARSYDLAALKYWGTSTTTNFPISN
                *********************************:***************.********:*

AT3G20840.1     YEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLY
gm030806_Glyma1 YEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLY
gm030807_Glyma1 YEKELDEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLY
                ****::******************************************************

AT3G20840.1     LGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESSTLPIGGGAAKRLKEAQ
gm030806_Glyma1 LGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQ
gm030807_Glyma1 LGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQ
                ******************************::.**********.****************

AT3G20840.1     ALESSRKREAEMIALGSS-FQYGGGSSTGSGSTSSRLQLQPYPL-----SIQQPLEPFLS
gm030806_Glyma1 ALESSRKRE-EMIALGSSTFQY--------GTTSSNSRLHAYPLMQHHHQFEQP-QPLLT
gm030807_Glyma1 ALESSRKRE-EMIALGSSTFQY--------GTTSSNSRLHAYPLMQHHHQFEQP-QPLLT
                ********* ******** ***        *:***. :*:.***     .::** :*:*:

AT3G20840.1     LQNNDI-SHYNNNNAHDSSSFNHHSYIQTQLHLHQQ----TNNYLQQQSSQNSQQLYNAY
gm030806_Glyma1 LQNHDISSHF----SHQQDPL-HQGYIQTQLQLHQQQSGGSSSYSFQNNNINNAQFYNGY
gm030807_Glyma1 LQNHDISSHF----SHQQDPL-HQGYIQTQLQLHQQQSGGSSSYSFQNNNINNAQFYNGY
                ***:** **:    :*:...: *:.******:****    :..*  *:.. *. *:**.*

AT3G20840.1     -LHSNPALLHGLV------STSIVDNNNNNGGSSGSYNTAAFLGNHGIGIGSSS----TV
gm030806_Glyma1 NLQNHPALLQGMINMGSSSSSSVLENNNSNNN-----NVGGFVGS-GFGMASNATSGNTV
gm030807_Glyma1 NLQNHPALLQGMINMGSSSSSSVLENNNSNNN-----NVGGFVGS-GFGMASNATSGNTV
                 *:.:****:*::      *:*:::***.*..     *...*:*. *:*:.*.:    **

AT3G20840.1     GSTEEFPTVKTDYDMPSSDGTGGYSGWT----SESVQGSNPGGVFTMWNE
gm030806_Glyma1 GTAEELGLVKVDYDMP----TGGYGGWSAAAAAESMQTSN-SGVFTMWND
gm030807_Glyma1 GTAEELGLVKVDYDMP----TGGYGGWSAAAAAESMQTSN-SGVFTMWND
                *::**:  **.*****    ****.**:    :**:* ** .*******:
BoxShade v3.31 C (beta, 970507) Output
AT3G20840.1     M N S N N W L G F P L S P N N S S L P P - - - - - - - - H E Y N L G L V S D H M D N P F Q T Q E W N M I N P H G G G G D
gm030806_Glyma1    M N - N N W L S F P L S P T H S S L P A H D L Q A T Q Y H Q F S L G L V N E N M E N P F Q N H D W S L I N T H - - - - -
gm030807_Glyma1    M N - N N W L S F P L S P T H S S L P A H D L Q A T Q Y H Q F S L G L V N E N M E N P F Q N H D W S L I N T H - - - - -
 
AT3G20840.1     E G G E V P K V A D F L G V S K P D E N Q S N - - - - - H L V A Y N D S D Y Y F H T N S L M P S V Q S N D V V V A A C D
gm030806_Glyma1    S S S E V P K V A D F L G V S K - S E N E S D L A A S L N E I Q S N D S D Y L F T N N S L V P - - M Q N P A V - - - - -
gm030807_Glyma1    S S S E V P K V A D F L G V S K - S E N E S D L A A S L N E I Q S N D S D Y L F T N N S L V P - - M Q N P A V - - - - -
 
AT3G20840.1     S N T P N N S S Y H E L Q E S A H - N L Q S L T L S M G T T A G N N V V D K A S P S E T T G D N A S G G A L A V V E T A
gm030806_Glyma1    - D T P S N - - - - E Y Q E N A N S S L Q S L T L S M G S - - - - - - - G K D S T C E T S G D N S T N T T T T T T V E A
gm030807_Glyma1    - D T P S N - - - - E Y Q E N A N S S L Q S L T L S M G S - - - - - - - G K D S T C E T S G D N S T N T T T T T T V E A
 
AT3G20840.1     T P R R A L D T F G Q R T S I Y R G V T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R H R W
gm030806_Glyma1    A P R R T L D T F G Q R T S I Y R G V T R L D C H S M L S L N P I Y I L Y C L I C C F C F R S N S A Y Y M K I Y R H R W
gm030807_Glyma1    A P R R T L D T F G Q R T S I Y R G V T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R H R W
 
AT3G20840.1     T G R Y E A H L W D N S C R R E G Q S R K G R Q V Y L G G Y D K E D K A A R S Y D L A A L K Y W G P S T T T N F P I T N
gm030806_Glyma1    T G R Y E A H L W D N S C R R E G Q S R K G R Q V Y L G G Y D K E E K A A R S Y D L A A L K Y W G T S T T T N F P I S N
gm030807_Glyma1    T G R Y E A H L W D N S C R R E G Q S R K G R Q V Y L G G Y D K E E K A A R S Y D L A A L K Y W G T S T T T N F P I S N
 
AT3G20840.1     Y E K E V E E M K H M T R Q E F V A A I R R K S S G F S R G A S M Y R G V T R H H Q H G R W Q A R I G R V A G N K D L Y
gm030806_Glyma1    Y E K E L D E M K H M T R Q E F V A A I R R K S S G F S R G A S M Y R G V T R H H Q H G R W Q A R I G R V A G N K D L Y
gm030807_Glyma1    Y E K E L D E M K H M T R Q E F V A A I R R K S S G F S R G A S M Y R G V T R H H Q H G R W Q A R I G R V A G N K D L Y
 
AT3G20840.1     L G T F S T E E E A A E A Y D I A A I K F R G L N A V T N F E I N R Y D V K A I L E S S T L P I G G G A A K R L K E A Q
gm030806_Glyma1    L G T F S T E E E A A E A Y D I A A I K F R G L N A V T N F D M S R Y D V K A I L E S N T L P I G G G A A K R L K E A Q
gm030807_Glyma1    L G T F S T E E E A A E A Y D I A A I K F R G L N A V T N F D M S R Y D V K A I L E S N T L P I G G G A A K R L K E A Q
 
AT3G20840.1     A L E S S R K R E A E M I A L G S S - F Q Y G G G S S T G S G S T S S R L Q L Q P Y P L - - - - - S I Q Q P L E P F L S
gm030806_Glyma1    A L E S S R K R E - E M I A L G S S T F Q Y - - - - - - - - G T T S S N S R L H A Y P L M Q H H H Q F E Q P - Q P L L T
gm030807_Glyma1    A L E S S R K R E - E M I A L G S S T F Q Y - - - - - - - - G T T S S N S R L H A Y P L M Q H H H Q F E Q P - Q P L L T
 
AT3G20840.1     L Q N N D I - S H Y N N N N A H D S S S F N H H S Y I Q T Q L H L H Q Q - - - - T N N Y L Q Q Q S S Q N S Q Q L Y N A Y
gm030806_Glyma1    L Q N H D I S S H F - - - - S H Q Q D P L - H Q G Y I Q T Q L Q L H Q Q Q S G G S S S Y S F Q N N N I N N A Q F Y N G Y
gm030807_Glyma1    L Q N H D I S S H F - - - - S H Q Q D P L - H Q G Y I Q T Q L Q L H Q Q Q S G G S S S Y S F Q N N N I N N A Q F Y N G Y
 
AT3G20840.1     - L H S N P A L L H G L V - - - - - - S T S I V D N N N N N G G S S G S Y N T A A F L G N H G I G I G S S S - - - - T V
gm030806_Glyma1    N L Q N H P A L L Q G M I N M G S S S S S S V L E N N N S N N N - - - - - N V G G F V G S - G F G M A S N A T S G N T V
gm030807_Glyma1    N L Q N H P A L L Q G M I N M G S S S S S S V L E N N N S N N N - - - - - N V G G F V G S - G F G M A S N A T S G N T V
 
AT3G20840.1     G S T E E F P T V K T D Y D M P S S D G T G G Y S G W T - - - - S E S V Q G S N P G G V F T M W N E
gm030806_Glyma1    G T A E E L G L V K V D Y D M P - - - - T G G Y G G W S A A A A A E S M Q T S N - S G V F T M W N D
gm030807_Glyma1    G T A E E L G L V K V D Y D M P - - - - T G G Y G G W S A A A A A E S M Q T S N - S G V F T M W N D
 
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