fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G20880.1 HDVTVDLHLGLPNLGD at 178/412 in AT3G20880.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp014462 not found in 390aa AT3G57670.1 1st_not 0.424164524 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G20880.1     ------MLFSTVLSHRTLYILTC----PNTLIHSYTH-----PHIHAYLAF-TGFLTQLH
pp014462_Pp1s20 MSSRYNPQNSVAVAHPNIPTTFCEWLKPSQPGQPLSHYPVAIPYEGVYPGFATGSSSE--
                         *..::* .:    *    *.   :. :*     *:  .* .* **  ::  

AT3G20880.1     HLEISCLLLLFFSLSSLLKLMADPDCIFRNGY--VDYYNYSFNYATSLSRIYNSHDSFYY
pp014462_Pp1s20 ---------SYFPVQP-----RSPAPVHRLQYPPADQYGYSCNSHQ------QSHDQFY-
                          :*.:..      .*  :.*  *  .* *.** *         :***.** 

AT3G20880.1     PHQTTNPNIN-------ENPNLTSPDSPPLREALPLLSLSPIHKHQE------------P
pp014462_Pp1s20 -NQQTRDEHEWRQRWHLQNNSMSS-------EPLPFLSLSPPTGRDDLSDSVMRTAILLP
                 :* *. : :       :* .::*       *.**:*****   :::            *

AT3G20880.1     TANHHEYYFMETTETSSNSNFLDQCQDSYRHDVTVDLHLGLPN---LGDGGSSSSDVVLD
pp014462_Pp1s20 EASH------ASEESDEN--------------VTVALHIGPPSSDAMSMSRSTESPSVYD
                 *.*       : *:..*              *** **:* *.   :. . *:.*  * *

AT3G20880.1     STDHQEGHHDHHQDQGLEVTMASDHDDEHGGLQRGNHL---HHFWIPTPSQILMGPTQFS
pp014462_Pp1s20 S-----------------LSLA-----ERERLQRGRGRLLEGEYWIPTPAQILVGPTQFS
                *                 :::*     *:  ****.      .:*****:***:******

AT3G20880.1     CPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKNNIDHPR
pp014462_Pp1s20 CPVCNKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCRNNIDHPR
                **:* ************************************:**********:*******

AT3G20880.1     ARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHK
pp014462_Pp1s20 SKPLKDFRTLQTHYKRKHGIKPFMCRKCSKAFAVRGDWRTHEKNCGKLWFCTCGSDFKHK
                ::*****************::** **:*.*****:**************:*:********

AT3G20880.1     RSLKDHVKAFGNGHVPCCGID--HEEEEAASDVEQQE-------
pp014462_Pp1s20 RSLKDHIRAFGNGHA-AHGMDSCEDEEDAVSEEDIDEEVSGGSQ
                ******::******. . *:*  .:**:*.*: : :*
BoxShade v3.31 C (beta, 970507) Output
AT3G20880.1     - - - - - - M L F S T V L S H R T L Y I L T C - - - - P N T L I H S Y T H - - - - - P H I H A Y L A F - T G F L T Q L H
pp014462_Pp1s20    M S S R Y N P Q N S V A V A H P N I P T T F C E W L K P S Q P G Q P L S H Y P V A I P Y E G V Y P G F A T G S S S E - -
 
AT3G20880.1     H L E I S C L L L L F F S L S S L L K L M A D P D C I F R N G Y - - V D Y Y N Y S F N Y A T S L S R I Y N S H D S F Y Y
pp014462_Pp1s20    - - - - - - - - - S Y F P V Q P - - - - - R S P A P V H R L Q Y P P A D Q Y G Y S C N S H Q - - - - - - Q S H D Q F Y -
 
AT3G20880.1     P H Q T T N P N I N - - - - - - - E N P N L T S P D S P P L R E A L P L L S L S P I H K H Q E - - - - - - - - - - - - P
pp014462_Pp1s20    - N Q Q T R D E H E W R Q R W H L Q N N S M S S - - - - - - - E P L P F L S L S P P T G R D D L S D S V M R T A I L L P
 
AT3G20880.1     T A N H H E Y Y F M E T T E T S S N S N F L D Q C Q D S Y R H D V T V D L H L G L P N - - - L G D G G S S S S D V V L D
pp014462_Pp1s20    E A S H - - - - - - A S E E S D E N - - - - - - - - - - - - - - V T V A L H I G P P S S D A M S M S R S T E S P S V Y D
 
AT3G20880.1     S T D H Q E G H H D H H Q D Q G L E V T M A S D H D D E H G G L Q R G N H L - - - H H F W I P T P S Q I L M G P T Q F S
pp014462_Pp1s20    S - - - - - - - - - - - - - - - - - L S L A - - - - - E R E R L Q R G R G R L L E G E Y W I P T P A Q I L V G P T Q F S
 
AT3G20880.1     C P L C F K T F N R Y N N M Q M H M W G H G S Q Y R K G P E S L R G T Q P T A M L K L P C Y C C A P G C K N N I D H P R
pp014462_Pp1s20    C P V C N K T F N R Y N N M Q M H M W G H G S Q Y R K G P E S L R G T Q P T A M L R L P C Y C C A P G C R N N I D H P R
 
AT3G20880.1     A R P L K D F R T L Q T H Y K R K H G V R P F A C R R C G K A F A V K G D W R T H E K N C G K L W Y C S C G S D F K H K
pp014462_Pp1s20    S K P L K D F R T L Q T H Y K R K H G I K P F M C R K C S K A F A V R G D W R T H E K N C G K L W F C T C G S D F K H K
 
AT3G20880.1     R S L K D H V K A F G N G H V P C C G I D - - H E E E E A A S D V E Q Q E - - - - - - -
pp014462_Pp1s20    R S L K D H I R A F G N G H A - A H G M D S C E D E E D A V S E E D I D E E V S G G S Q
 
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