fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G20880.1 HDVTVDLHLGLPNLGD at 178/412 in AT3G20880.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp013471 not found in 444aa AT3G57670.1 not_not 0.415167095 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G20880.1     MLFSTVLSHRTLYILTCPNT---------------LIHSYTH-PHIHAYLAFTGFLTQLH
pp013471_Pp1s35 MSFKGAKKFVIRFSATATDSGSAVAGVGKYSGSRVLFSSYTNGPELSHLLERNSTLSELD
                * *. . ..   :  *..::               *: ***: *.:   *  .. *::*.

AT3G20880.1     HLEISCLLLLFFSLSSLLKLMADPDCIFRNGYVDYYNYSFNYATSLSRIYNSHDSFYYPH
pp013471_Pp1s35 --------------------------------IDTVENSKDDSATMSSRYNPQSSVAVAH
                                                :*  : * : ::::*  **.:.*.  .*

AT3G20880.1     QTTNPNINENPNLT-----SPDSP-------PLREALPLLSL------------------
pp013471_Pp1s35 ----------PILTFCEWLKPSQPGQSLPHYPV--AIPCESLYPGSASGSSCESYFPAQP
                          * **     .*..*       *:  *:*  **                  

AT3G20880.1     ---SPIHKHQ-------EPTANHHEYY---------------FMETTETSSNSNFLD---
pp013471_Pp1s35 RSSNPIHRRQLQAQFYNQQARDEHEWRQQRHLQKDVSSEPLPFLSLSPPTGNDDLSDPAL
                   .***::*       : : :.**:                *:. : .:.*.:: *   

AT3G20880.1     ----------QCQDSYRHDVTVDLHLGLPN---LGDGGSSSSDVVLDSTDHQEGHHDHHQ
pp013471_Pp1s35 RTAILLPEASHASEESDENVTVALHIGPPSSDAMSMSRSTESPSVYDSLSLVERER----
                          :..:.  .:*** **:* *.   :. . *:.*  * ** .  * .:    

AT3G20880.1     DQGLEVTMASDHDDEHGGLQRGN---HLHHFWIPTPSQILMGPTQFSCPLCFKTFNRYNN
pp013471_Pp1s35 ------------------LQRGQSRLHEGQYWIPTPAQILVGPTQFSCPVCNKTFNRYNN
                                  ****:   *  ::*****:***:********:* ********

AT3G20880.1     MQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQTH
pp013471_Pp1s35 MQMHMWGHGSQYRKGPESLRGTQPTAMLRLACYCCSPGCRNNIDHPRSKPLKDFRTLQTH
                ****************************:*.****:***:*******::***********

AT3G20880.1     YKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNG
pp013471_Pp1s35 YKRKHGIKPFMCRKCSKAFAVRGDWRTHEKNCGKLWFCTCGSDFKHKRSLKDHIRAFGNG
                ******::** **:*.*****:**************:*:**************::*****

AT3G20880.1     HVPCCGID--HEEEEAASDVEQQE-------
pp013471_Pp1s35 HA-AHGIDSCEDDEDPVSEEDGDEEVSGGSH
                *. . ***  .::*:..*: : :*
BoxShade v3.31 C (beta, 970507) Output
AT3G20880.1     M L F S T V L S H R T L Y I L T C P N T - - - - - - - - - - - - - - - L I H S Y T H - P H I H A Y L A F T G F L T Q L H
pp013471_Pp1s35    M S F K G A K K F V I R F S A T A T D S G S A V A G V G K Y S G S R V L F S S Y T N G P E L S H L L E R N S T L S E L D
 
AT3G20880.1     H L E I S C L L L L F F S L S S L L K L M A D P D C I F R N G Y V D Y Y N Y S F N Y A T S L S R I Y N S H D S F Y Y P H
pp013471_Pp1s35    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I D T V E N S K D D S A T M S S R Y N P Q S S V A V A H
 
AT3G20880.1     Q T T N P N I N E N P N L T - - - - - S P D S P - - - - - - - P L R E A L P L L S L - - - - - - - - - - - - - - - - - -
pp013471_Pp1s35    - - - - - - - - - - P I L T F C E W L K P S Q P G Q S L P H Y P V - - A I P C E S L Y P G S A S G S S C E S Y F P A Q P
 
AT3G20880.1     - - - S P I H K H Q - - - - - - - E P T A N H H E Y Y - - - - - - - - - - - - - - - F M E T T E T S S N S N F L D - - -
pp013471_Pp1s35    R S S N P I H R R Q L Q A Q F Y N Q Q A R D E H E W R Q Q R H L Q K D V S S E P L P F L S L S P P T G N D D L S D P A L
 
AT3G20880.1     - - - - - - - - - - Q C Q D S Y R H D V T V D L H L G L P N - - - L G D G G S S S S D V V L D S T D H Q E G H H D H H Q
pp013471_Pp1s35    R T A I L L P E A S H A S E E S D E N V T V A L H I G P P S S D A M S M S R S T E S P S V Y D S L S L V E R E R - - - -
 
AT3G20880.1     D Q G L E V T M A S D H D D E H G G L Q R G N - - - H L H H F W I P T P S Q I L M G P T Q F S C P L C F K T F N R Y N N
pp013471_Pp1s35    - - - - - - - - - - - - - - - - - - L Q R G Q S R L H E G Q Y W I P T P A Q I L V G P T Q F S C P V C N K T F N R Y N N
 
AT3G20880.1     M Q M H M W G H G S Q Y R K G P E S L R G T Q P T A M L K L P C Y C C A P G C K N N I D H P R A R P L K D F R T L Q T H
pp013471_Pp1s35    M Q M H M W G H G S Q Y R K G P E S L R G T Q P T A M L R L A C Y C C S P G C R N N I D H P R S K P L K D F R T L Q T H
 
AT3G20880.1     Y K R K H G V R P F A C R R C G K A F A V K G D W R T H E K N C G K L W Y C S C G S D F K H K R S L K D H V K A F G N G
pp013471_Pp1s35    Y K R K H G I K P F M C R K C S K A F A V R G D W R T H E K N C G K L W F C T C G S D F K H K R S L K D H I R A F G N G
 
AT3G20880.1     H V P C C G I D - - H E E E E A A S D V E Q Q E - - - - - - -
pp013471_Pp1s35    H A - A H G I D S C E D D E D P V S E E D G D E E V S G G S H
 
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