fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G20880.1 HDVTVDLHLGLPNLGD at 178/412 in AT3G20880.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb004016 not found in 404aa AT3G57670.1 1st_not 0.449871465 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G20880.1     MLFSTVLSHRTLYILTCPNTLIHSYTHPHIHAYLAFTGFLTQLHHLEISCLLLLFFSLSS
Sb004016_Sorbi1 ------------------------------------------------------------
                                                                            

AT3G20880.1     LLKLMADPDCIFRNGYVDYYNYSFNYATSLSRIYNSHDSFYYPHQTTNPNINENPNLTSP
Sb004016_Sorbi1 ----MGDPYTNFLRGY--YSHFPPSNAPPVTSFPSSYASSYLHHP------------PPP
                    *.**   * .**  * ::. . *..:: : .*: * *  *             ..*

AT3G20880.1     DSPPLREALPLLS-LSPIHKHQEPTANHHEYY-----------FMETTETSSNSNFLDQC
Sb004016_Sorbi1 PSPPIREALPLLSNLTP---SSSSATNHHHHHGGGDVQDHKDCCKRATSCSDDQEAADQA
                 ***:******** *:*    ...::***.::             .:*. *.:.:  **.

AT3G20880.1     QDSYRHDVTVDLHLGLPNLGDGGSSSSDVVLDSTDHQ-----EGHHDHHQDQGLEVTMAS
Sb004016_Sorbi1 AAG---EVTVALHIGLPS-----PSPSDSAADGGDSQEPAAAEGRSQLQQQEGGGGEEEE
                  .   :*** **:***.     .*.** . *. * *     **: : :*::*      .

AT3G20880.1     DHDDEH-------------GGLQRGNHLHHFWIPTPSQILMGPTQFSCPLCFKTFNRYNN
Sb004016_Sorbi1 EEEGEEDAAMAVGCASIGIGRLTKG----QYWIPTPSQILIGPTQFSCPVCYKTFNRYNN
                :.:.*.             * * :*    ::*********:********:*:********

AT3G20880.1     MQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQTH
Sb004016_Sorbi1 MQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQTH
                ****************************:*******.**:********************

AT3G20880.1     YKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNG
Sb004016_Sorbi1 YRRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCACGSDFKHKRSLKDHIRAFGRG
                *:****::** **:*******:****************:**************::***.*

AT3G20880.1     HVPCCGI------DHEEEEAASDVEQQE--------------------------------
Sb004016_Sorbi1 HA-ACGIDCFDDLDDDDRDPSSEVDHAAAAAANNTTTTTSSAAAANAQAQHHHHHSVWKP
                *. .***      *.::.:.:*:*::                                  

AT3G20880.1     ------------------
Sb004016_Sorbi1 PPPPPLSSSSRGSGDPLL
BoxShade v3.31 C (beta, 970507) Output
AT3G20880.1     M L F S T V L S H R T L Y I L T C P N T L I H S Y T H P H I H A Y L A F T G F L T Q L H H L E I S C L L L L F F S L S S
Sb004016_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G20880.1     L L K L M A D P D C I F R N G Y V D Y Y N Y S F N Y A T S L S R I Y N S H D S F Y Y P H Q T T N P N I N E N P N L T S P
Sb004016_Sorbi1    - - - - M G D P Y T N F L R G Y - - Y S H F P P S N A P P V T S F P S S Y A S S Y L H H P - - - - - - - - - - - - P P P
 
AT3G20880.1     D S P P L R E A L P L L S - L S P I H K H Q E P T A N H H E Y Y - - - - - - - - - - - F M E T T E T S S N S N F L D Q C
Sb004016_Sorbi1    P S P P I R E A L P L L S N L T P - - - S S S S A T N H H H H H G G G D V Q D H K D C C K R A T S C S D D Q E A A D Q A
 
AT3G20880.1     Q D S Y R H D V T V D L H L G L P N L G D G G S S S S D V V L D S T D H Q - - - - - E G H H D H H Q D Q G L E V T M A S
Sb004016_Sorbi1    A A G - - - E V T V A L H I G L P S - - - - - P S P S D S A A D G G D S Q E P A A A E G R S Q L Q Q Q E G G G G E E E E
 
AT3G20880.1     D H D D E H - - - - - - - - - - - - - G G L Q R G N H L H H F W I P T P S Q I L M G P T Q F S C P L C F K T F N R Y N N
Sb004016_Sorbi1    E E E G E E D A A M A V G C A S I G I G R L T K G - - - - Q Y W I P T P S Q I L I G P T Q F S C P V C Y K T F N R Y N N
 
AT3G20880.1     M Q M H M W G H G S Q Y R K G P E S L R G T Q P T A M L K L P C Y C C A P G C K N N I D H P R A R P L K D F R T L Q T H
Sb004016_Sorbi1    M Q M H M W G H G S Q Y R K G P E S L R G T Q P T A M L R L P C Y C C A A G C R N N I D H P R A R P L K D F R T L Q T H
 
AT3G20880.1     Y K R K H G V R P F A C R R C G K A F A V K G D W R T H E K N C G K L W Y C S C G S D F K H K R S L K D H V K A F G N G
Sb004016_Sorbi1    Y R R K H G I K P F M C R K C G K A F A V R G D W R T H E K N C G K L W Y C A C G S D F K H K R S L K D H I R A F G R G
 
AT3G20880.1     H V P C C G I - - - - - - D H E E E E A A S D V E Q Q E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb004016_Sorbi1    H A - A C G I D C F D D L D D D D R D P S S E V D H A A A A A A N N T T T T T S S A A A A N A Q A Q H H H H H S V W K P
 
AT3G20880.1     - - - - - - - - - - - - - - - - - -
Sb004016_Sorbi1    P P P P P L S S S S R G S G D P L L
 
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