fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G20880.1 HDVTVDLHLGLPNLGD at 178/412 in AT3G20880.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023456 GGGCRRLRLRLRGGRR in 199/489 AT3G57670.1 not_not 0.421593830 III
Sb016295 AEGDPMDLEAAAPTDDDA in 147/428 AT3G57670.1 not_not 0.417737789 III
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G20880.1     MLFSTVLSHRTLYILTCPNTLIHSYTHPHIHAYLAFTGFLTQLHHLEISCLLLLFFSLSS
Sb023456_Sorbi1 ---------------------LASYYHYHLR-----------------SC----------
Sb016295_Sorbi1 ------------------------------------------------------------
                                                                            

AT3G20880.1     LLKLMADPDCIFR-NGY-VDYYNYSFNYATSLS------------RIYNSHDSFYYP--H
Sb023456_Sorbi1 --AAMENPYTSFI-NSHPSQHHHHRYYYHPAAPPAPAP-------TAYPSLLPFFAA--H
Sb016295_Sorbi1 ----MEDPYRSFFKNSY--------YYYASSYPAAPAPHHLPPSLPPYTSLYPAAAAPQY
                    * :*   *  *.:        : * .: .              * *  .   .  :

AT3G20880.1     QTT----NPNINENPNLT-SPDSPPLREALPLLSLSP---------IHKHQEPTANHHEY
Sb023456_Sorbi1 H------QPPPAPAP----TPPSPPLREALPLLSLAPAPPPPRGIGITRQQDEKRRGRRA
Sb016295_Sorbi1 HPACFFQPPPPSSLPPLHDSPPSPPLREALPLLSQSPTRAASRA---------QPRPHVA
                :       *     *    :* ************ :*                  . :  

AT3G20880.1     YFMETTE---------------TSSNSN------------FLD-----------------
Sb023456_Sorbi1 PALDSEEDKDEGDEEEEEDEGPTESGGNHGQQKRLGQGALFADLNAKA----AGDDPMDV
Sb016295_Sorbi1 VDSDSEDDADDFVLREAVGSSVTPS----------TRAPLFADLNCMPSCCDAEGDPMDL
                   :: :               * *               * *                 

AT3G20880.1     ---QCQD-----SYRHDVTVDLHLG----LP----NLGDGGSS--SSDVVL-DSTDHQEG
Sb023456_Sorbi1 EVEEAADGSGSGSAVGDVTVALRIGLPLPLPPAPTTTSTGAADLQVSDLPA-----AGAR
Sb016295_Sorbi1 EAAAPTD--------DDAAVALRIG----LPPAPVNGGCGGAE---ADLLSGLSGRAGCG
                      *         *.:* *::*    **    . . *.:.   :*:           

AT3G20880.1     HHDHHQDQGLEVTMASDHDDEH--------------------------------GGLQRG
Sb023456_Sorbi1 RQQHNHDDG-----GEEEDDDR---ENGGGEEEEEEEETTAVAAPLGFPSTPIIGRLNMG
Sb016295_Sorbi1 GMEH------------EEDEDECKVDTGDGDE----------VVPLGFASTP-IGKLNKG
                  :*            :.*::.                                * *: *

AT3G20880.1     NHLHHFWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPT
Sb023456_Sorbi1 ----QYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGIQPT
Sb016295_Sorbi1 ----QYWIPTPAQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGVQPT
                    ::*****:***:********:*:***************************** ***

AT3G20880.1     AMLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDW
Sb023456_Sorbi1 AMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGLKPFLCRRCGKAFAVKGDW
Sb016295_Sorbi1 AMLRLPCYCCAPGCRNNIDHPRARPLKDFRTLQTHYKRKHGLKPFLCRKCGKAFAVKGDW
                ***:******:***:********:*****************::** **:***********

AT3G20880.1     RTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGH--VPCC---------GIDHEEEEA
Sb023456_Sorbi1 RTHEKNCGRLWYCLCGSEFKHKRSLKDHARAFGHGHGFVVGAGAGAGCGG-GLDDDDDGA
Sb016295_Sorbi1 RTHEKNCGKLWYCLCGSEFKHKRSLKDHARAFGHGHG-AFGCNLDGGSGADGLDDDDDGA
                ********:**** ***:**********.:***:**  .  .         *:*.::: *

AT3G20880.1     ASDVEQQE---------------
Sb023456_Sorbi1 VSDVDQHD--GATAASRSM----
Sb016295_Sorbi1 VSEI-EHDLCAAACSSRSAAAAR
                .*:: :::
BoxShade v3.31 C (beta, 970507) Output
AT3G20880.1     M L F S T V L S H R T L Y I L T C P N T L I H S Y T H P H I H A Y L A F T G F L T Q L H H L E I S C L L L L F F S L S S
Sb023456_Sorbi1    - - - - - - - - - - - - - - - - - - - - - L A S Y Y H Y H L R - - - - - - - - - - - - - - - - - S C - - - - - - - - - -
Sb016295_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G20880.1     L L K L M A D P D C I F R - N G Y - V D Y Y N Y S F N Y A T S L S - - - - - - - - - - - - R I Y N S H D S F Y Y P - - H
Sb023456_Sorbi1    - - A A M E N P Y T S F I - N S H P S Q H H H H R Y Y Y H P A A P P A P A P - - - - - - - T A Y P S L L P F F A A - - H
Sb016295_Sorbi1    - - - - M E D P Y R S F F K N S Y - - - - - - - - Y Y Y A S S Y P A A P A P H H L P P S L P P Y T S L Y P A A A A P Q Y
 
AT3G20880.1     Q T T - - - - N P N I N E N P N L T - S P D S P P L R E A L P L L S L S P - - - - - - - - - I H K H Q E P T A N H H E Y
Sb023456_Sorbi1    H - - - - - - Q P P P A P A P - - - - T P P S P P L R E A L P L L S L A P A P P P P R G I G I T R Q Q D E K R R G R R A
Sb016295_Sorbi1    H P A C F F Q P P P P S S L P P L H D S P P S P P L R E A L P L L S Q S P T R A A S R A - - - - - - - - - Q P R P H V A
 
AT3G20880.1     Y F M E T T E - - - - - - - - - - - - - - - T S S N S N - - - - - - - - - - - - F L D - - - - - - - - - - - - - - - - -
Sb023456_Sorbi1    P A L D S E E D K D E G D E E E E E D E G P T E S G G N H G Q Q K R L G Q G A L F A D L N A K A - - - - A G D D P M D V
Sb016295_Sorbi1    V D S D S E D D A D D F V L R E A V G S S V T P S - - - - - - - - - - T R A P L F A D L N C M P S C C D A E G D P M D L
 
AT3G20880.1     - - - Q C Q D - - - - - S Y R H D V T V D L H L G - - - - L P - - - - N L G D G G S S - - S S D V V L - D S T D H Q E G
Sb023456_Sorbi1    E V E E A A D G S G S G S A V G D V T V A L R I G L P L P L P P A P T T T S T G A A D L Q V S D L P A - - - - - A G A R
Sb016295_Sorbi1    E A A A P T D - - - - - - - - D D A A V A L R I G - - - - L P P A P V N G G C G G A E - - - A D L L S G L S G R A G C G
 
AT3G20880.1     H H D H H Q D Q G L E V T M A S D H D D E H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G G L Q R G
Sb023456_Sorbi1    R Q Q H N H D D G - - - - - G E E E D D D R - - - E N G G G E E E E E E E E T T A V A A P L G F P S T P I I G R L N M G
Sb016295_Sorbi1    G M E H - - - - - - - - - - - - E E D E D E C K V D T G D G D E - - - - - - - - - - V V P L G F A S T P - I G K L N K G
 
AT3G20880.1     N H L H H F W I P T P S Q I L M G P T Q F S C P L C F K T F N R Y N N M Q M H M W G H G S Q Y R K G P E S L R G T Q P T
Sb023456_Sorbi1    - - - - Q Y W I P T P S Q I L I G P T Q F S C P V C F K T F N R Y N N M Q M H M W G H G S Q Y R K G P E S L R G I Q P T
Sb016295_Sorbi1    - - - - Q Y W I P T P A Q I L I G P T Q F S C P V C Y K T F N R Y N N M Q M H M W G H G S Q Y R K G P E S L R G V Q P T
 
AT3G20880.1     A M L K L P C Y C C A P G C K N N I D H P R A R P L K D F R T L Q T H Y K R K H G V R P F A C R R C G K A F A V K G D W
Sb023456_Sorbi1    A M L R L P C Y C C S P G C R N N I D H P R A K P L K D F R T L Q T H Y K R K H G L K P F L C R R C G K A F A V K G D W
Sb016295_Sorbi1    A M L R L P C Y C C A P G C R N N I D H P R A R P L K D F R T L Q T H Y K R K H G L K P F L C R K C G K A F A V K G D W
 
AT3G20880.1     R T H E K N C G K L W Y C S C G S D F K H K R S L K D H V K A F G N G H - - V P C C - - - - - - - - - G I D H E E E E A
Sb023456_Sorbi1    R T H E K N C G R L W Y C L C G S E F K H K R S L K D H A R A F G H G H G F V V G A G A G A G C G G - G L D D D D D G A
Sb016295_Sorbi1    R T H E K N C G K L W Y C L C G S E F K H K R S L K D H A R A F G H G H G - A F G C N L D G G S G A D G L D D D D D G A
 
AT3G20880.1     A S D V E Q Q E - - - - - - - - - - - - - - -
Sb023456_Sorbi1    V S D V D Q H D - - G A T A A S R S M - - - -
Sb016295_Sorbi1    V S E I - E H D L C A A A C S S R S A A A A R
 
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