fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G20880.1 HDVTVDLHLGLPNLGD at 178/412 in AT3G20880.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb004016 not found in 404aa AT3G57670.1 1st_not 0.449871465 II
Sb023456 GGGCRRLRLRLRGGRR in 199/489 AT3G57670.1 not_not 0.421593830 III
Sb016295 AEGDPMDLEAAAPTDDDA in 147/428 AT3G57670.1 not_not 0.417737789 III
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G20880.1     MLFSTVLSHRTLYILTCPNTLIHSYTHPHIHAYLAFTGFLTQLHHLEISCLLLLFFSLSS
Sb016295_Sorbi1 ------------------------------------------------------------
Sb023456_Sorbi1 ---------------------LASYYHYHLR-----------------SC----------
Sb004016_Sorbi1 ------------------------------------------------------------
                                                                            

AT3G20880.1     LLKLMADPDCIFRNG-----YVDYYNYSFNYATS---------LSRIYNSHDSFYYP-HQ
Sb016295_Sorbi1 ----MEDPYRSFFKN-------SYYYYASSYPAAPAPHHLPPSLPPYTSLYPAAAAPQYH
Sb023456_Sorbi1 --AAMENPYTSFINSHPSQHHHHRYYYHPAAPPAPAP-------TAYPSLLPFFAA--HH
Sb004016_Sorbi1 ----MGDPYTNFLRG---------YYSH--FPPSNAPP-----VTSFPSSYASSYL--HH
                    * :*   * ..         *      ..:          .   .         ::

AT3G20880.1     TT----NPNINENPNLT-SPDSPPLREALPLLS-LSPI-----------------HKHQE
Sb016295_Sorbi1 PACFFQPPPPSSLPPLHDSPPSPPLREALPLLS-QSPT-----------------RA-AS
Sb023456_Sorbi1 ------QPPPAPAP----TPPSPPLREALPLLS-LAPAPPPPRGIGITRQQDEKRRGRRA
Sb004016_Sorbi1 ------PPP----------PPSPPIREALPLLSNLTPS--------------------SS
                       *           * ***:********  :*                       

AT3G20880.1     PTANHHEYYFMETTETSSNS--------------------------NFLDQCQD------
Sb016295_Sorbi1 RAQPRPHVAVDSDSEDDADDFVLREAVGSSVTPSTR---APLFADLNCMPSCCDAEGDPM
Sb023456_Sorbi1 PALDSEEDKDEGDEEEEEDEGPTES--GGNHGQQKRLGQGALFADLN-AKAAGD---DPM
Sb004016_Sorbi1 SATNHHHHHGGGDVQDHKD-------------CCKR------------ATSCSD---D--
                 :    .       :   :                                . *      

AT3G20880.1     --------------SYRHDVTVDLHLGLP--------NLGDGGSSSSDVVLDSTDHQEGH
Sb016295_Sorbi1 DLEAAAPTD--------DDAAVALRIGLP-PAP------VNGGCGGAEADLLSG--LSGR
Sb023456_Sorbi1 DVEVEEAADGSGSGSAVGDVTVALRIGLPLPLPPAPTTTSTGAADLQVSDLPAA--GARR
Sb004016_Sorbi1 ----QEAAD----QAAAGEVTVALHIGLPSPSP------SDSAADGGDSQEPAA--AEGR
                                  :.:* *::***            ....       :      :

AT3G20880.1     HDHHQDQGLE--------VTMASDHDDE----------------------HGGLQRGNHL
Sb016295_Sorbi1 A------GC---------GGMEHEEDEDECKVDTGDGDEVVPLGFASTP-IGKLNKG---
Sb023456_Sorbi1 QQHNHDDGGEEEDDDRENGGGEEEEEEE------ETTAVAAPLGFPSTPIIGRLNMG---
Sb004016_Sorbi1 SQLQQQEG----------GGGEEEEEEE------GEEDAAMAVGCASIG-IGRLTKG---
                       *               :.:::                       * *  *   

AT3G20880.1     HHFWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAML
Sb016295_Sorbi1 -QYWIPTPAQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGVQPTAML
Sb023456_Sorbi1 -QYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGIQPTAML
Sb004016_Sorbi1 -QYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAML
                 ::*****:***:********:*:***************************** ******

AT3G20880.1     KLPCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTH
Sb016295_Sorbi1 RLPCYCCAPGCRNNIDHPRARPLKDFRTLQTHYKRKHGLKPFLCRKCGKAFAVKGDWRTH
Sb023456_Sorbi1 RLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGLKPFLCRRCGKAFAVKGDWRTH
Sb004016_Sorbi1 RLPCYCCAAGCRNNIDHPRARPLKDFRTLQTHYRRKHGIKPFMCRKCGKAFAVRGDWRTH
                :******:.**:********:************:****::** **:*******:******

AT3G20880.1     EKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGH--VPC-----------CGIDHEEEEAA
Sb016295_Sorbi1 EKNCGKLWYCLCGSEFKHKRSLKDHARAFGHGHGAFGCNLDGGSGA---DGLDDDDDGAV
Sb023456_Sorbi1 EKNCGRLWYCLCGSEFKHKRSLKDHARAFGHGHGFV---VGAGAGAGCGGGLDDDDDGAV
Sb004016_Sorbi1 EKNCGKLWYCACGSDFKHKRSLKDHIRAFGRGH--------AACGIDCFDDLDDDDRDPS
                *****:**** ***:********** :***.**                 .:*.::  . 

AT3G20880.1     SDVEQQE---------------------------------------------------
Sb016295_Sorbi1 SEIE-HDLCAAACSSR----SAAAAR--------------------------------
Sb023456_Sorbi1 SDVDQHDGATAASRSM------------------------------------------
Sb004016_Sorbi1 SEVD-HAAAAAANNTTTTTSSAAAANAQAQHHHHHSVWKPPPPPPLSSSSRGSGDPLL
                *::: :
BoxShade v3.31 C (beta, 970507) Output
AT3G20880.1     M L F S T V L S H R T L Y I L T C P N T L I H S Y T H P H I H A Y L A F T G F L T Q L H H L E I S C L L L L F F S L S S
Sb016295_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb023456_Sorbi1    - - - - - - - - - - - - - - - - - - - - - L A S Y Y H Y H L R - - - - - - - - - - - - - - - - - S C - - - - - - - - - -
Sb004016_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G20880.1     L L K L M A D P D C I F R N G - - - - - Y V D Y Y N Y S F N Y A T S - - - - - - - - - L S R I Y N S H D S F Y Y P - H Q
Sb016295_Sorbi1    - - - - M E D P Y R S F F K N - - - - - - - S Y Y Y Y A S S Y P A A P A P H H L P P S L P P Y T S L Y P A A A A P Q Y H
Sb023456_Sorbi1    - - A A M E N P Y T S F I N S H P S Q H H H H R Y Y Y H P A A P P A P A P - - - - - - - T A Y P S L L P F F A A - - H H
Sb004016_Sorbi1    - - - - M G D P Y T N F L R G - - - - - - - - - Y Y S H - - F P P S N A P P - - - - - V T S F P S S Y A S S Y L - - H H
 
AT3G20880.1     T T - - - - N P N I N E N P N L T - S P D S P P L R E A L P L L S - L S P I - - - - - - - - - - - - - - - - - H K H Q E
Sb016295_Sorbi1    P A C F F Q P P P P S S L P P L H D S P P S P P L R E A L P L L S - Q S P T - - - - - - - - - - - - - - - - - R A - A S
Sb023456_Sorbi1    - - - - - - Q P P P A P A P - - - - T P P S P P L R E A L P L L S - L A P A P P P P R G I G I T R Q Q D E K R R G R R A
Sb004016_Sorbi1    - - - - - - P P P - - - - - - - - - - P P S P P I R E A L P L L S N L T P S - - - - - - - - - - - - - - - - - - - - S S
 
AT3G20880.1     P T A N H H E Y Y F M E T T E T S S N S - - - - - - - - - - - - - - - - - - - - - - - - - - N F L D Q C Q D - - - - - -
Sb016295_Sorbi1    R A Q P R P H V A V D S D S E D D A D D F V L R E A V G S S V T P S T R - - - A P L F A D L N C M P S C C D A E G D P M
Sb023456_Sorbi1    P A L D S E E D K D E G D E E E E E D E G P T E S - - G G N H G Q Q K R L G Q G A L F A D L N - A K A A G D - - - D P M
Sb004016_Sorbi1    S A T N H H H H H G G G D V Q D H K D - - - - - - - - - - - - - C C K R - - - - - - - - - - - - A T S C S D - - - D - -
 
AT3G20880.1     - - - - - - - - - - - - - - S Y R H D V T V D L H L G L P - - - - - - - - N L G D G G S S S S D V V L D S T D H Q E G H
Sb016295_Sorbi1    D L E A A A P T D - - - - - - - - D D A A V A L R I G L P - P A P - - - - - - V N G G C G G A E A D L L S G - - L S G R
Sb023456_Sorbi1    D V E V E E A A D G S G S G S A V G D V T V A L R I G L P L P L P P A P T T T S T G A A D L Q V S D L P A A - - G A R R
Sb004016_Sorbi1    - - - - Q E A A D - - - - Q A A A G E V T V A L H I G L P S P S P - - - - - - S D S A A D G G D S Q E P A A - - A E G R
 
AT3G20880.1     H D H H Q D Q G L E - - - - - - - - V T M A S D H D D E - - - - - - - - - - - - - - - - - - - - - - H G G L Q R G N H L
Sb016295_Sorbi1    A - - - - - - G C - - - - - - - - - G G M E H E E D E D E C K V D T G D G D E V V P L G F A S T P - I G K L N K G - - -
Sb023456_Sorbi1    Q Q H N H D D G G E E E D D D R E N G G G E E E E E E E - - - - - - E T T A V A A P L G F P S T P I I G R L N M G - - -
Sb004016_Sorbi1    S Q L Q Q Q E G - - - - - - - - - - G G G E E E E E E E - - - - - - G E E D A A M A V G C A S I G - I G R L T K G - - -
 
AT3G20880.1     H H F W I P T P S Q I L M G P T Q F S C P L C F K T F N R Y N N M Q M H M W G H G S Q Y R K G P E S L R G T Q P T A M L
Sb016295_Sorbi1    - Q Y W I P T P A Q I L I G P T Q F S C P V C Y K T F N R Y N N M Q M H M W G H G S Q Y R K G P E S L R G V Q P T A M L
Sb023456_Sorbi1    - Q Y W I P T P S Q I L I G P T Q F S C P V C F K T F N R Y N N M Q M H M W G H G S Q Y R K G P E S L R G I Q P T A M L
Sb004016_Sorbi1    - Q Y W I P T P S Q I L I G P T Q F S C P V C Y K T F N R Y N N M Q M H M W G H G S Q Y R K G P E S L R G T Q P T A M L
 
AT3G20880.1     K L P C Y C C A P G C K N N I D H P R A R P L K D F R T L Q T H Y K R K H G V R P F A C R R C G K A F A V K G D W R T H
Sb016295_Sorbi1    R L P C Y C C A P G C R N N I D H P R A R P L K D F R T L Q T H Y K R K H G L K P F L C R K C G K A F A V K G D W R T H
Sb023456_Sorbi1    R L P C Y C C S P G C R N N I D H P R A K P L K D F R T L Q T H Y K R K H G L K P F L C R R C G K A F A V K G D W R T H
Sb004016_Sorbi1    R L P C Y C C A A G C R N N I D H P R A R P L K D F R T L Q T H Y R R K H G I K P F M C R K C G K A F A V R G D W R T H
 
AT3G20880.1     E K N C G K L W Y C S C G S D F K H K R S L K D H V K A F G N G H - - V P C - - - - - - - - - - - C G I D H E E E E A A
Sb016295_Sorbi1    E K N C G K L W Y C L C G S E F K H K R S L K D H A R A F G H G H G A F G C N L D G G S G A - - - D G L D D D D D G A V
Sb023456_Sorbi1    E K N C G R L W Y C L C G S E F K H K R S L K D H A R A F G H G H G F V - - - V G A G A G A G C G G G L D D D D D G A V
Sb004016_Sorbi1    E K N C G K L W Y C A C G S D F K H K R S L K D H I R A F G R G H - - - - - - - - A A C G I D C F D D L D D D D R D P S
 
AT3G20880.1     S D V E Q Q E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb016295_Sorbi1    S E I E - H D L C A A A C S S R - - - - S A A A A R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb023456_Sorbi1    S D V D Q H D G A T A A S R S M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb004016_Sorbi1    S E V D - H A A A A A A N N T T T T T S S A A A A N A Q A Q H H H H H S V W K P P P P P P L S S S S R G S G D P L L
 
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