fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G21175.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm002368 not found in 456aa AT3G21175.2 1st_1st 0.400346620 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G21175.2     ---------------------MDDLHGRNGRMHI-----------GV----AQNPMHVQY
Sm002368_Selmo1 RARLWVVFFFTSSCAMAAEGHIHAHHQNVHSMHVDDTDEVGEEIEGVNHLHPHSHMHM-H
                                     :.  * .   **:           **    .:. **: :

AT3G21175.2     EDHGL--HHIDNENSMMDD-------------HADGGMDEGVETDIPSHPGNSADNRGEV
Sm002368_Selmo1 EDHGLHDHHHDIEIEDQDDEEQDGEGLDEAEMHSDGGH--------PVEPPAALTGRSHA
                *****  ** * * .  **             *:***         * .*  :  .*...

AT3G21175.2     VDRGIENGDQLTLSFQGQVYVFDRVSPEKVQAVLLLLGGREVPHTLPTTLGSPHQNNRGL
Sm002368_Selmo1 T-------TQLTLSYQGEVYVFDTVAPEKVQEVLLLLGGREIQSSLPGASMPGHHYGKGL
                .        *****:**:***** *:***** *********:  :** :  . *: .:**

AT3G21175.2     SGTPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDD
Sm002368_Selmo1 SELPSRMNMPQRITALTRFREKRKERCYDKKIRYTVRKEVAQRMHRKKGQFASSKVLQEE
                *  *.*:.:***:::* ******* * :**.********** **:******:*:*  :::

AT3G21175.2     SGSTGSDWGSNQSWAVEGTE---TQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNACGL
Sm002368_Selmo1 AAAKAN--GSSPPTPGQPTPPGGAPQPEILCTHCGTGERSTPMMRRGPSGPRTLCNACGL
                :.:...  **. . . : *    : :**:** ****.*:*********.***********

AT3G21175.2     MWANKGTLRDLSK--VPPPQTPQHLSLNKNEDANLEADQMMEVTGDISNTQ
Sm002368_Selmo1 MWANKGVLRDLSKNAQAPGSVLQIPTLTQSESEGHKPDPA-----------
                ******.******   .* .. *  :*.:.*. . :.*
BoxShade v3.31 C (beta, 970507) Output
AT3G21175.2     - - - - - - - - - - - - - - - - - - - - - M D D L H G R N G R M H I - - - - - - - - - - - G V - - - - A Q N P M H V Q Y
Sm002368_Selmo1    R A R L W V V F F F T S S C A M A A E G H I H A H H Q N V H S M H V D D T D E V G E E I E G V N H L H P H S H M H M - H
 
AT3G21175.2     E D H G L - - H H I D N E N S M M D D - - - - - - - - - - - - - H A D G G M D E G V E T D I P S H P G N S A D N R G E V
Sm002368_Selmo1    E D H G L H D H H H D I E I E D Q D D E E Q D G E G L D E A E M H S D G G H - - - - - - - - P V E P P A A L T G R S H A
 
AT3G21175.2     V D R G I E N G D Q L T L S F Q G Q V Y V F D R V S P E K V Q A V L L L L G G R E V P H T L P T T L G S P H Q N N R G L
Sm002368_Selmo1    T - - - - - - - T Q L T L S Y Q G E V Y V F D T V A P E K V Q E V L L L L G G R E I Q S S L P G A S M P G H H Y G K G L
 
AT3G21175.2     S G T P Q R L S V P Q R L A S L L R F R E K R K G R N F D K T I R Y T V R K E V A L R M Q R K K G Q F T S A K S S N D D
Sm002368_Selmo1    S E L P S R M N M P Q R I T A L T R F R E K R K E R C Y D K K I R Y T V R K E V A Q R M H R K K G Q F A S S K V L Q E E
 
AT3G21175.2     S G S T G S D W G S N Q S W A V E G T E - - - T Q K P E V L C R H C G T S E K S T P M M R R G P D G P R T L C N A C G L
Sm002368_Selmo1    A A A K A N - - G S S P P T P G Q P T P P G G A P Q P E I L C T H C G T G E R S T P M M R R G P S G P R T L C N A C G L
 
AT3G21175.2     M W A N K G T L R D L S K - - V P P P Q T P Q H L S L N K N E D A N L E A D Q M M E V T G D I S N T Q
Sm002368_Selmo1    M W A N K G V L R D L S K N A Q A P G S V L Q I P T L T Q S E S E G H K P D P A - - - - - - - - - - -
 
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