fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G21270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm017047 not found in 141aa AT3G21270.1 1st_1st 0.460377358 Ia
Pt011402 not found in 235aa AT3G21270.1 1st_1st 0.460377358 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G21270.1     MQDPAAYYQTMMAKQQQQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCR
pt011402_POPTR_ MQDPSTAFHTI-------K-PQFPEQEQLKCPRCDSNNTKFCYYNNYNLSQPRHFCKNCK
gm017047_Glyma0 MQDP-TAFQGV-------KPPQFPEQEQLKCPRCDSNNTKFCYYNNYNLSQPRHFCKNCR
                **** : :: :       : ***.************ ********************.*:

AT3G21270.1     RYWTKGGALRNVPVGGGSRKNATKRSTSS--------------SSSASSPSNSSQNKKTK
pt011402_POPTR_ RYWTKGGALRNIPVGGGSRKN-TKRSSNTKRANPDPNPDPVKPTRRVADSSSSSATSST-
gm017047_Glyma0 RYWTKGGALRNIPVGGGSRKT-TKRSSSTL-------------SKRSSAPSSSSAVS---
                ***********:********. ****:.:              :   : .*.**  .   

AT3G21270.1     NPDPDPDPRNSQKP----DLDPTRMLYGFPIGDQDVKGMEI-GGSFSSLLANNMQLG---
pt011402_POPTR_ ---------SGQQLAGNGNQDPTR-VYGVEA-DPDRKILDM-GGSFSSLLASSGQFGSIF
gm017047_Glyma0 ------------------DPDPTR-ICTNPV-DQDQRVLNIGGGSFSSLLASSGHFGTLL
                                  : **** :      * * : ::: *********.. ::*   

AT3G21270.1     ----LGGGG---IMLDGSGWD-------HPGMGLG----------------LRRTEPGNN
pt011402_POPTR_ EGLDSGGSGLKMVRMGGFGEDLNAGPSRNPGLDLQGSSNNNTTNDGGGESYLQGGEWGNS
gm017047_Glyma0 EGL-------------------------NPS-----------------------------
                                            :*.                             

AT3G21270.1     NNNPWTDLAMNRAEKN--
pt011402_POPTR_ NNG-WPGLAIYTPGSSFQ
gm017047_Glyma0 ------------------
BoxShade v3.31 C (beta, 970507) Output
AT3G21270.1     M Q D P A A Y Y Q T M M A K Q Q Q Q Q Q P Q F A E Q E Q L K C P R C D S P N T K F C Y Y N N Y N L S Q P R H F C K S C R
pt011402_POPTR_    M Q D P S T A F H T I - - - - - - - K - P Q F P E Q E Q L K C P R C D S N N T K F C Y Y N N Y N L S Q P R H F C K N C K
gm017047_Glyma0    M Q D P - T A F Q G V - - - - - - - K P P Q F P E Q E Q L K C P R C D S N N T K F C Y Y N N Y N L S Q P R H F C K N C R
 
AT3G21270.1     R Y W T K G G A L R N V P V G G G S R K N A T K R S T S S - - - - - - - - - - - - - - S S S A S S P S N S S Q N K K T K
pt011402_POPTR_    R Y W T K G G A L R N I P V G G G S R K N - T K R S S N T K R A N P D P N P D P V K P T R R V A D S S S S S A T S S T -
gm017047_Glyma0    R Y W T K G G A L R N I P V G G G S R K T - T K R S S S T L - - - - - - - - - - - - - S K R S S A P S S S S A V S - - -
 
AT3G21270.1     N P D P D P D P R N S Q K P - - - - D L D P T R M L Y G F P I G D Q D V K G M E I - G G S F S S L L A N N M Q L G - - -
pt011402_POPTR_    - - - - - - - - - S G Q Q L A G N G N Q D P T R - V Y G V E A - D P D R K I L D M - G G S F S S L L A S S G Q F G S I F
gm017047_Glyma0    - - - - - - - - - - - - - - - - - - D P D P T R - I C T N P V - D Q D Q R V L N I G G G S F S S L L A S S G H F G T L L
 
AT3G21270.1     - - - - L G G G G - - - I M L D G S G W D - - - - - - - H P G M G L G - - - - - - - - - - - - - - - - L R R T E P G N N
pt011402_POPTR_    E G L D S G G S G L K M V R M G G F G E D L N A G P S R N P G L D L Q G S S N N N T T N D G G G E S Y L Q G G E W G N S
gm017047_Glyma0    E G L - - - - - - - - - - - - - - - - - - - - - - - - - N P S - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G21270.1     N N N P W T D L A M N R A E K N - -
pt011402_POPTR_    N N G - W P G L A I Y T P G S S F Q
gm017047_Glyma0    - - - - - - - - - - - - - - - - - -
 
0