fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G21270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011402 not found in 235aa AT3G21270.1 1st_1st 0.460377358 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G21270.1     MQDPAAYYQTMMAKQQQQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCR
pt011402_POPTR_ MQDPSTAFHTI--------KPQFPEQEQLKCPRCDSNNTKFCYYNNYNLSQPRHFCKNCK
                ****:: ::*:        :***.************ ********************.*:

AT3G21270.1     RYWTKGGALRNVPVGGGSRKNATKRSTSSSSSASSPSNSSQNKKTKNPDPDPDPRNSQKP
pt011402_POPTR_ RYWTKGGALRNIPVGGGSRKN-TKRSS--------------NTKRANPDPNPDP---VKP
                ***********:********* ****:              *.*  ****:***    **

AT3G21270.1     -------------------------DLDPTRMLYGFPIGDQDVKGMEIGGSFSSLLANNM
pt011402_POPTR_ TRRVADSSSSSATSSTSGQQLAGNGNQDPTR-VYGVE-ADPDRKILDMGGSFSSLLASSG
                                         : **** :**.  .* * * :::*********.. 

AT3G21270.1     QLG-------LGGGG---IMLDGSGWD-------HPGMGLG----------------LRR
pt011402_POPTR_ QFGSIFEGLDSGGSGLKMVRMGGFGEDLNAGPSRNPGLDLQGSSNNNTTNDGGGESYLQG
                *:*        **.*   : :.* * *       :**:.*                 *: 

AT3G21270.1     TEPGNNNNNPWTDLAMNRAEKN--
pt011402_POPTR_ GEWGNSNNG-WPGLAIYTPGSSFQ
                 * **.**. *..**:  . ..
BoxShade v3.31 C (beta, 970507) Output
AT3G21270.1     M Q D P A A Y Y Q T M M A K Q Q Q Q Q Q P Q F A E Q E Q L K C P R C D S P N T K F C Y Y N N Y N L S Q P R H F C K S C R
pt011402_POPTR_    M Q D P S T A F H T I - - - - - - - - K P Q F P E Q E Q L K C P R C D S N N T K F C Y Y N N Y N L S Q P R H F C K N C K
 
AT3G21270.1     R Y W T K G G A L R N V P V G G G S R K N A T K R S T S S S S S A S S P S N S S Q N K K T K N P D P D P D P R N S Q K P
pt011402_POPTR_    R Y W T K G G A L R N I P V G G G S R K N - T K R S S - - - - - - - - - - - - - - N T K R A N P D P N P D P - - - V K P
 
AT3G21270.1     - - - - - - - - - - - - - - - - - - - - - - - - - D L D P T R M L Y G F P I G D Q D V K G M E I G G S F S S L L A N N M
pt011402_POPTR_    T R R V A D S S S S S A T S S T S G Q Q L A G N G N Q D P T R - V Y G V E - A D P D R K I L D M G G S F S S L L A S S G
 
AT3G21270.1     Q L G - - - - - - - L G G G G - - - I M L D G S G W D - - - - - - - H P G M G L G - - - - - - - - - - - - - - - - L R R
pt011402_POPTR_    Q F G S I F E G L D S G G S G L K M V R M G G F G E D L N A G P S R N P G L D L Q G S S N N N T T N D G G G E S Y L Q G
 
AT3G21270.1     T E P G N N N N N P W T D L A M N R A E K N - -
pt011402_POPTR_    G E W G N S N N G - W P G L A I Y T P G S S F Q
 
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