fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G21270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm040914 not found in 211aa AT3G21270.1 not_1st 0.449056603 II
Gm038214 not found in 212aa AT3G21270.1 not_1st 0.437735849 II
Gm029973 not found in 335aa AT3G21270.1 not_1st 0.415094339 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G21270.1     ----------------------------------MQDPAAYYQTMMAKQQQQQQPQFAEQ
gm040914_Glyma1 ----------------------------------MQDPTLF---------QPMKPHFPEQ
gm029973_Glyma1 MLGGASASHIPGERKISINNGGGGRALLLTPPTSSSSPSCTTSITTSTATATATSSNSEN
gm038214_Glyma1 ----------------------------------MQDPTLF---------QPMKPHFPEQ
                                                   ..*:               .  .*:

AT3G21270.1     EQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKN-----
gm040914_Glyma1 EQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKN-----
gm029973_Glyma1 QNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKSSGG
gm038214_Glyma1 EQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKN-----
                ::*:******.************:*******.*************:*:***.**.     

AT3G21270.1     ---------ATKRSTSSSSSASSPS--------------NSSQNKK-------TKNPDPD
gm040914_Glyma1 ----------TKRSSSS--------------------------NNN-------TKRASPS
gm029973_Glyma1 MSNSVAKQTATKMKAVASELGRSPQGLFDQELPQTPILWGSPQNSQLMALLRATQNQNPN
gm038214_Glyma1 ----------TKRSSSS--------------------------NNN-------TKHASPS
                          ** .: :                          *.:       *:. .*.

AT3G21270.1     PDPRNSQKPDLDPTRMLYGFPIGDQDVKGM-EIGGSFS------SLLAN-----------
gm040914_Glyma1 PPVSSAPAPEPDPTR------IGPTPVVG----GGSFS------SLLAS-----------
gm029973_Glyma1 PNPS--------PMSI---------SVKGEGNLMGSHSHMVSTESLLANGLLNPRTSLGF
gm038214_Glyma1 PPVSSAPAPEIDPTR------TDPNPVGG----GGSFR------SLLAS-----------
                *           *             * *     **.       ****.           

AT3G21270.1     -NMQLGLGGGGIMLDGSGWDH---------------------------------------
gm040914_Glyma1 -SGHLGLGNLLEGLNSSGSNLKTVQMEE------FGENVSSG------------------
gm029973_Glyma1 DDGRVGEALPSLGLCSSFWRNNQDQTQQQNNGFVVGEHQSSGVQELYHKLRSSSSVNYWG
gm038214_Glyma1 -SGHLGLGNLLEGLNSSGSNLKSVQMEE------FGENVSSG------------------
                 . ::* .     * .*                                           

AT3G21270.1     ----P------GMGLGLRRTEPGN---------------NNNNPWTDLAMNRAEKN--
gm040914_Glyma1 ----PVADPDSGRNPGLEMQSNGNAENFLSLQNGDSSCWNGTSGWSHLAIFTPGSSFQ
gm029973_Glyma1 SDNSPVF----LSNMASSSSSLSNILESSSVSGSEFGCWNPTLSWSDLPTTNGAYP--
gm038214_Glyma1 ---TPVAVPGSGQNPGLEMQSNGNAESFLSLQNGDSGCCNGTNGWSNLAIFTPGSSYQ
                    *        . .    . .*               * .  *:.*.
BoxShade v3.31 C (beta, 970507) Output
AT3G21270.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q D P A A Y Y Q T M M A K Q Q Q Q Q Q P Q F A E Q
gm040914_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q D P T L F - - - - - - - - - Q P M K P H F P E Q
gm029973_Glyma1    M L G G A S A S H I P G E R K I S I N N G G G G R A L L L T P P T S S S S P S C T T S I T T S T A T A T A T S S N S E N
gm038214_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q D P T L F - - - - - - - - - Q P M K P H F P E Q
 
AT3G21270.1     E Q L K C P R C D S P N T K F C Y Y N N Y N L S Q P R H F C K S C R R Y W T K G G A L R N V P V G G G S R K N - - - - -
gm040914_Glyma1    E Q L K C P R C D S T N T K F C Y Y N N Y N L S Q P R H F C K N C R R Y W T K G G A L R N I P V G G G S R K N - - - - -
gm029973_Glyma1    Q N L R C P R C D S S N T K F C Y Y N N Y N L T Q P R H F C K T C R R Y W T K G G A L R N V P I G G G C R K S K S S G G
gm038214_Glyma1    E Q L K C P R C D S T N T K F C Y Y N N Y N L S Q P R H F C K N C R R Y W T K G G A L R N I P V G G G S R K N - - - - -
 
AT3G21270.1     - - - - - - - - - A T K R S T S S S S S A S S P S - - - - - - - - - - - - - - N S S Q N K K - - - - - - - T K N P D P D
gm040914_Glyma1    - - - - - - - - - - T K R S S S S - - - - - - - - - - - - - - - - - - - - - - - - - - N N N - - - - - - - T K R A S P S
gm029973_Glyma1    M S N S V A K Q T A T K M K A V A S E L G R S P Q G L F D Q E L P Q T P I L W G S P Q N S Q L M A L L R A T Q N Q N P N
gm038214_Glyma1    - - - - - - - - - - T K R S S S S - - - - - - - - - - - - - - - - - - - - - - - - - - N N N - - - - - - - T K H A S P S
 
AT3G21270.1     P D P R N S Q K P D L D P T R M L Y G F P I G D Q D V K G M - E I G G S F S - - - - - - S L L A N - - - - - - - - - - -
gm040914_Glyma1    P P V S S A P A P E P D P T R - - - - - - I G P T P V V G - - - - G G S F S - - - - - - S L L A S - - - - - - - - - - -
gm029973_Glyma1    P N P S - - - - - - - - P M S I - - - - - - - - - S V K G E G N L M G S H S H M V S T E S L L A N G L L N P R T S L G F
gm038214_Glyma1    P P V S S A P A P E I D P T R - - - - - - T D P N P V G G - - - - G G S F R - - - - - - S L L A S - - - - - - - - - - -
 
AT3G21270.1     - N M Q L G L G G G G I M L D G S G W D H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm040914_Glyma1    - S G H L G L G N L L E G L N S S G S N L K T V Q M E E - - - - - - F G E N V S S G - - - - - - - - - - - - - - - - - -
gm029973_Glyma1    D D G R V G E A L P S L G L C S S F W R N N Q D Q T Q Q Q N N G F V V G E H Q S S G V Q E L Y H K L R S S S S V N Y W G
gm038214_Glyma1    - S G H L G L G N L L E G L N S S G S N L K S V Q M E E - - - - - - F G E N V S S G - - - - - - - - - - - - - - - - - -
 
AT3G21270.1     - - - - P - - - - - - G M G L G L R R T E P G N - - - - - - - - - - - - - - - N N N N P W T D L A M N R A E K N - -
gm040914_Glyma1    - - - - P V A D P D S G R N P G L E M Q S N G N A E N F L S L Q N G D S S C W N G T S G W S H L A I F T P G S S F Q
gm029973_Glyma1    S D N S P V F - - - - L S N M A S S S S S L S N I L E S S S V S G S E F G C W N P T L S W S D L P T T N G A Y P - -
gm038214_Glyma1    - - - T P V A V P G S G Q N P G L E M Q S N G N A E S F L S L Q N G D S G C C N G T N G W S N L A I F T P G S S Y Q
 
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