fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G21270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm017047 not found in 141aa AT3G21270.1 1st_1st 0.460377358 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G21270.1     MQDPAAYYQTMMAKQQQQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCR
gm017047_Glyma0 MQDPTAF--------QGVKPPQFPEQEQLKCPRCDSNNTKFCYYNNYNLSQPRHFCKNCR
                ****:*:        *  : ***.************ ********************.**

AT3G21270.1     RYWTKGGALRNVPVGGGSRKNATKRSTSS-SSSASSPSNSSQNKKTKNPDPDPDPRNSQK
gm017047_Glyma0 RYWTKGGALRNIPVGGGSRK-TTKRSSSTLSKRSSAPSSSSAVS---------DP-----
                ***********:******** :****:*: *. :*:**.**  .         **     

AT3G21270.1     PDLDPTRMLYGFPIGDQDVKGMEI-GGSFSSLLANNMQLGLGGGGIMLDGSGWDHPGMGL
gm017047_Glyma0 ---DPTRICTN-PV-DQDQRVLNIGGGSFSSLLASS-----GHFGTLLEGL---------
                   ****:  . *: *** : ::* *********..     *  * :*:*          

AT3G21270.1     GLRRTEPGNNNNNPWTDLAMNRAEKN
gm017047_Glyma0 ------------NPS-----------
                            **
BoxShade v3.31 C (beta, 970507) Output
AT3G21270.1     M Q D P A A Y Y Q T M M A K Q Q Q Q Q Q P Q F A E Q E Q L K C P R C D S P N T K F C Y Y N N Y N L S Q P R H F C K S C R
gm017047_Glyma0    M Q D P T A F - - - - - - - - Q G V K P P Q F P E Q E Q L K C P R C D S N N T K F C Y Y N N Y N L S Q P R H F C K N C R
 
AT3G21270.1     R Y W T K G G A L R N V P V G G G S R K N A T K R S T S S - S S S A S S P S N S S Q N K K T K N P D P D P D P R N S Q K
gm017047_Glyma0    R Y W T K G G A L R N I P V G G G S R K - T T K R S S S T L S K R S S A P S S S S A V S - - - - - - - - - D P - - - - -
 
AT3G21270.1     P D L D P T R M L Y G F P I G D Q D V K G M E I - G G S F S S L L A N N M Q L G L G G G G I M L D G S G W D H P G M G L
gm017047_Glyma0    - - - D P T R I C T N - P V - D Q D Q R V L N I G G G S F S S L L A S S - - - - - G H F G T L L E G L - - - - - - - - -
 
AT3G21270.1     G L R R T E P G N N N N N P W T D L A M N R A E K N
gm017047_Glyma0    - - - - - - - - - - - - N P S - - - - - - - - - - -
 
0