fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G21890.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037451 not found in 125aa AT4G15248.1 1st_not 0.403041825 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G21890.1     MCRGLNNEESRRSDGGGC-----------RSLCTRPSVPVRCELCDGDASVFCEADSAFL
pt037451_POPTR_ MCRGIHQE--RNNQGGSCGEEVVSSKATSRLVC--------CELCGSRASLYCQADDAFL
                ****:::*  *..:**.*           * :*        ****.. **::*:**.***

AT3G21890.1     CRKCDRWVHGANFLAWRHVRRVLCTSCQKLTRRCLVGDHDFHVVLPSVTTVGE-----TT
pt037451_POPTR_ CQKCDKWVHGANFLAQRHVRCMLCNTCQNLTQRYLIGAST-ELLLPTIVSWRERRQCNSN
                *:***:********* **** :**.:**:**:* *:*    .::**::.:  *     :.

AT3G21890.1     VENRSEQDNHEVPFVFL
pt037451_POPTR_ LEKKS-SGSLKMPFLFL
                :*::* ... ::**:**
BoxShade v3.31 C (beta, 970507) Output
AT3G21890.1     M C R G L N N E E S R R S D G G G C - - - - - - - - - - - R S L C T R P S V P V R C E L C D G D A S V F C E A D S A F L
pt037451_POPTR_    M C R G I H Q E - - R N N Q G G S C G E E V V S S K A T S R L V C - - - - - - - - C E L C G S R A S L Y C Q A D D A F L
 
AT3G21890.1     C R K C D R W V H G A N F L A W R H V R R V L C T S C Q K L T R R C L V G D H D F H V V L P S V T T V G E - - - - - T T
pt037451_POPTR_    C Q K C D K W V H G A N F L A Q R H V R C M L C N T C Q N L T Q R Y L I G A S T - E L L L P T I V S W R E R R Q C N S N
 
AT3G21890.1     V E N R S E Q D N H E V P F V F L
pt037451_POPTR_    L E K K S - S G S L K M P F L F L
 
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