fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23050.1 NLKATELCLGLPGGAE at 11/210 in AT3G23050.2
FSETVDLMLNLQSNKE at 42/210 in AT3G23050.2
NLKATELCLGLPGGAE at 11/243 in AT3G23050.1
FSETVDLMLNLQSNKE at 42/243 in AT3G23050.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031861 not found in 502aa AT3G04730.1 1st_not 0.576659038 II
Gm026657 VFEETELRLGLRLGLP in 7/248 AT3G23050.1 not_1st 0.627002288 II
ETTSVDLMLNLSPKEA in 50/248
Pt042254 NYKETELCLGLPGAVG in 19/248 AT4G14550.1 1st_not 0.723112128 II
FAETVDLKLNLQAKEG in 51/248
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G23050.1     -------------------MIGQL---MNLKATE--------------LCLGLPGGAEA-
Sb031861_Sorbi1 LDEHLPRHVADEHPVAVLVLVGR----HVLGAVE-QIHQLALVHAVHPLRPTASNGEGAE
pt042254_POPTR_ ---------------MTTSVLGTERTDLNYKETE--------------LCLGLPGAVGAK
gm026657_Glyma1 ---------------------------MVFEETELRL----------GLRLGLPGNGAAP
                                                .*              *    ..   * 

AT3G23050.1     --VESPAKSAVGSKRGFSET-------VDLMLNLQSNKEGSVDL--------KNVSAVPK
Sb031861_Sorbi1 HLLERLGQLLV--------------ALVHLEVHLAQVRRAVQAHLHE----RRTTASCRR
pt042254_POPTR_ NEVETPNKAT--GKRGFAET-------VDLKLNLQA-KEGVMDLNEN----IKNITSKDK
gm026657_Glyma1 T-TEAAAELGV-RKRGFSETETDETTSVDLMLNLSP-KEASAAATTDGADPRENPKTSPK
                   *   :                   *.* ::*   :..            ..  :  :

AT3G23050.1     EK-------------------TTLKDPSKPPAK------AQVVGWPPVRNYRKNMMTQQK
Sb031861_Sorbi1 RRGLVGVFAAAGALVGLHGHDVLPERPDRWPSHHLSLGGARLLGGVSLH-----------
pt042254_POPTR_ NHL----------------PAVTIKDPAKPPAK------AQVVGWPPVRSYRKNVMAQKN
gm026657_Glyma1 EK------------------NLPLLDPAKPPAK------AQVVGWPPVRSFRKNMFAAQK
                .:                        * : *::      *:::*  .::           

AT3G23050.1     TSSGAEEASSEK-----------------AGNFGGGAAGAGLVKVSMDGAPY---LRKVD
Sb031861_Sorbi1 -GGGGDDAALARGPLHLPADGGLLRGGHAAGVFL-GGGNTVLMLVRLRRLQYGRGSRRLQ
pt042254_POPTR_ ASEEGEKAST-------------------------GGSSAAFVKVCMDGAPY---LRKVD
gm026657_Glyma1 -SSGGEESEK-------------------------NSPNASFVKVSMDGAPY---LRKVD
                 .  .:.:                           .. .: :: * :    *    *:::

AT3G23050.1     LKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMN--------ESKLMNLLNSSEYVPS
Sb031861_Sorbi1 LQLE------VDGLCE--APLPGGDDRAPPFADHLSPAAGQAQTELRLLE--------PQ
pt042254_POPTR_ LKMYRSYQELSDALAKMFSSFTMGNYGAQGMIDFMN--------ESKLMDLLNSSEYVPS
gm026657_Glyma1 LKMYKSYPELSDALGKMFSSFTIGNCESQGFKDFMN--------ESKLMDLLNSSDYVPT
                *::        *.* :  :.:. *:  :  : *.:.        * :*::        * 

AT3G23050.1     YEDKD-------------GDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCK
Sb031861_Sorbi1 VRRRHCCCRRHWPSSSPLGSRLLL--LPCFCFV--CFALLASQDEEAGWL--------CK
pt042254_POPTR_ YEDKD-------------GDWMLVGDVPWEMFVNSCKRLRIMKGSEAIGLAPRAMEK-CK
gm026657_Glyma1 YEDRD-------------GDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAVEK-CK
                 . :.             *. :*:  :*   **  *  *   :..**  *        **

AT3G23050.1     NRS----------------
Sb031861_Sorbi1 CKGGGFANARGLGRGATTT
pt042254_POPTR_ SRT----------------
gm026657_Glyma1 NRS----------------
                 :
BoxShade v3.31 C (beta, 970507) Output
AT3G23050.1     - - - - - - - - - - - - - - - - - - - M I G Q L - - - M N L K A T E - - - - - - - - - - - - - - L C L G L P G G A E A -
Sb031861_Sorbi1    L D E H L P R H V A D E H P V A V L V L V G R - - - - H V L G A V E - Q I H Q L A L V H A V H P L R P T A S N G E G A E
pt042254_POPTR_    - - - - - - - - - - - - - - - M T T S V L G T E R T D L N Y K E T E - - - - - - - - - - - - - - L C L G L P G A V G A K
gm026657_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - M V F E E T E L R L - - - - - - - - - - G L R L G L P G N G A A P
 
AT3G23050.1     - - V E S P A K S A V G S K R G F S E T - - - - - - - V D L M L N L Q S N K E G S V D L - - - - - - - - K N V S A V P K
Sb031861_Sorbi1    H L L E R L G Q L L V - - - - - - - - - - - - - - A L V H L E V H L A Q V R R A V Q A H L H E - - - - R R T T A S C R R
pt042254_POPTR_    N E V E T P N K A T - - G K R G F A E T - - - - - - - V D L K L N L Q A - K E G V M D L N E N - - - - I K N I T S K D K
gm026657_Glyma1    T - T E A A A E L G V - R K R G F S E T E T D E T T S V D L M L N L S P - K E A S A A A T T D G A D P R E N P K T S P K
 
AT3G23050.1     E K - - - - - - - - - - - - - - - - - - - T T L K D P S K P P A K - - - - - - A Q V V G W P P V R N Y R K N M M T Q Q K
Sb031861_Sorbi1    R R G L V G V F A A A G A L V G L H G H D V L P E R P D R W P S H H L S L G G A R L L G G V S L H - - - - - - - - - - -
pt042254_POPTR_    N H L - - - - - - - - - - - - - - - - P A V T I K D P A K P P A K - - - - - - A Q V V G W P P V R S Y R K N V M A Q K N
gm026657_Glyma1    E K - - - - - - - - - - - - - - - - - - N L P L L D P A K P P A K - - - - - - A Q V V G W P P V R S F R K N M F A A Q K
 
AT3G23050.1     T S S G A E E A S S E K - - - - - - - - - - - - - - - - - A G N F G G G A A G A G L V K V S M D G A P Y - - - L R K V D
Sb031861_Sorbi1    - G G G G D D A A L A R G P L H L P A D G G L L R G G H A A G V F L - G G G N T V L M L V R L R R L Q Y G R G S R R L Q
pt042254_POPTR_    A S E E G E K A S T - - - - - - - - - - - - - - - - - - - - - - - - - G G S S A A F V K V C M D G A P Y - - - L R K V D
gm026657_Glyma1    - S S G G E E S E K - - - - - - - - - - - - - - - - - - - - - - - - - N S P N A S F V K V S M D G A P Y - - - L R K V D
 
AT3G23050.1     L K M Y K S Y Q D L S D A L A K M F S S F T M G N Y G A Q G M I D F M N - - - - - - - - E S K L M N L L N S S E Y V P S
Sb031861_Sorbi1    L Q L E - - - - - - V D G L C E - - A P L P G G D D R A P P F A D H L S P A A G Q A Q T E L R L L E - - - - - - - - P Q
pt042254_POPTR_    L K M Y R S Y Q E L S D A L A K M F S S F T M G N Y G A Q G M I D F M N - - - - - - - - E S K L M D L L N S S E Y V P S
gm026657_Glyma1    L K M Y K S Y P E L S D A L G K M F S S F T I G N C E S Q G F K D F M N - - - - - - - - E S K L M D L L N S S D Y V P T
 
AT3G23050.1     Y E D K D - - - - - - - - - - - - - G D W M L V G D V P W E M F V E S C K R L R I M K G S E A V G L A P R A M E K Y C K
Sb031861_Sorbi1    V R R R H C C C R R H W P S S S P L G S R L L L - - L P C F C F V - - C F A L L A S Q D E E A G W L - - - - - - - - C K
pt042254_POPTR_    Y E D K D - - - - - - - - - - - - - G D W M L V G D V P W E M F V N S C K R L R I M K G S E A I G L A P R A M E K - C K
gm026657_Glyma1    Y E D R D - - - - - - - - - - - - - G D W M L V G D V P W E M F V E S C K R L R I M K G K E A I G L A P R A V E K - C K
 
AT3G23050.1     N R S - - - - - - - - - - - - - - - -
Sb031861_Sorbi1    C K G G G F A N A R G L G R G A T T T
pt042254_POPTR_    S R T - - - - - - - - - - - - - - - -
gm026657_Glyma1    N R S - - - - - - - - - - - - - - - -
 
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