fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23050.1 NLKATELCLGLPGGAE at 11/210 in AT3G23050.2
FSETVDLMLNLQSNKE at 42/210 in AT3G23050.2
NLKATELCLGLPGGAE at 11/243 in AT3G23050.1
FSETVDLMLNLQSNKE at 42/243 in AT3G23050.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os041779 AFEATELRLGLPGGGG in 11/277 AT3G23050.1 1st_1st 0.569794050 Ia
FAETIDLKLKLEPAAA in 44/277
Gm028045 LTNEHGLSLNLKETEL in 10/239 AT3G23050.1 1st_1st 0.768878718 Ia
FSETVDLKLNLQTKED in 47/239

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CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G23050.1     ---MI----GQLMNLKATELCLGLPGGAEAVESPAKSAV--GSKRGFSETVDLMLNLQSN
gm028045_Glyma1 MTTMLTNEHGLSLNLKETELCLGLPGGGSEVETPRATG-----KRGFSETVDLKLNLQTK
Os041779_Os12t0 ---M-----AADLAFEATELRLGLPGGGGDGDAAAAAARSSSGKRGFAETIDLKLKLEPA
                   *     .  : :: *** ******.   ::.  :.     ****:**:** *:*:. 

AT3G23050.1     K---EGSVDLKNVSAVPKEK---------------------------------TTLKDPS
gm028045_Glyma1 E---DLNENLKNVS---KEK---------------------------------TLLKDPA
Os041779_Os12t0 AAAVDDDDDKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPE
                    : . : ::.:   :**                                 *   ** 

AT3G23050.1     KPPA-KAQVVGWPPVRNYRKNMMTQQKTSSG--AEEASSEKAGNFGGGAAGAGLVKVSMD
gm028045_Glyma1 KPPA-KAQVVGWPPVRSYRKNMMAVQKVSNEEVAEKTTSSTIANSG------AFVKVSMD
Os041779_Os12t0 KPRAPKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDK----SGAGAAAAAFVKVSMD
                ** * ***********.****::: *  ..   *:   ..     *      .:******

AT3G23050.1     GAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLNSSEYVP
gm028045_Glyma1 GAPYLRKVDLTMYKSYKDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMDLLNSSEYVP
Os041779_Os12t0 GAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHG-VNGMNESKIADLLNGSEYVP
                **********.***** :**.** *******:** *::* :: *****: :***.*****

AT3G23050.1     SYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCKNRS
gm028045_Glyma1 TYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLAPRAMEK-CKSRS
Os041779_Os12t0 TYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEK-CKNRS
                :******************** *************:********* **.**


BoxShade v3.31 C (beta, 970507) Output
AT3G23050.1     - - - M I - - - - G Q L M N L K A T E L C L G L P G G A E A V E S P A K S A V - - G S K R G F S E T V D L M L N L Q S N
gm028045_Glyma1    M T T M L T N E H G L S L N L K E T E L C L G L P G G G S E V E T P R A T G - - - - - K R G F S E T V D L K L N L Q T K
Os041779_Os12t0    - - - M - - - - - A A D L A F E A T E L R L G L P G G G G D G D A A A A A A R S S S G K R G F A E T I D L K L K L E P A
 
AT3G23050.1     K - - - E G S V D L K N V S A V P K E K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T T L K D P S
gm028045_Glyma1    E - - - D L N E N L K N V S - - - K E K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T L L K D P A
Os041779_Os12t0    A A A V D D D D D K E E A A A D D R E K K V D I V G A D N D D A S P P A A A A A G G M K R S P S Q S S V V T A A A D P E
 
AT3G23050.1     K P P A - K A Q V V G W P P V R N Y R K N M M T Q Q K T S S G - - A E E A S S E K A G N F G G G A A G A G L V K V S M D
gm028045_Glyma1    K P P A - K A Q V V G W P P V R S Y R K N M M A V Q K V S N E E V A E K T T S S T I A N S G - - - - - - A F V K V S M D
Os041779_Os12t0    K P R A P K A Q V V G W P P V R S Y R K N I L A V Q A D K G K D A A D G G G D K - - - - S G A G A A A A A F V K V S M D
 
AT3G23050.1     G A P Y L R K V D L K M Y K S Y Q D L S D A L A K M F S S F T M G N Y G A Q G M I D F M N E S K L M N L L N S S E Y V P
gm028045_Glyma1    G A P Y L R K V D L T M Y K S Y K D L S D A L A K M F S S F T M G N Y G A Q G M I D F M N E S K L M D L L N S S E Y V P
Os041779_Os12t0    G A P Y L R K V D L K M Y K S Y L E L S K A L E K M F S S F T I G N C G S H G - V N G M N E S K I A D L L N G S E Y V P
 
AT3G23050.1     S Y E D K D G D W M L V G D V P W E M F V E S C K R L R I M K G S E A V G L A P R A M E K Y C K N R S
gm028045_Glyma1    T Y E D K D G D W M L V G D V P W E M F V G S C K R L R I M K G S E A I G L A P R A M E K - C K S R S
Os041779_Os12t0    T Y E D K D G D W M L V G D V P W E M F V E S C K R L R I M K G S E A I G L A P R A M E K - C K N R S
 
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