fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23050.1 NLKATELCLGLPGGAE at 11/210 in AT3G23050.2
FSETVDLMLNLQSNKE at 42/210 in AT3G23050.2
NLKATELCLGLPGGAE at 11/243 in AT3G23050.1
FSETVDLMLNLQSNKE at 42/243 in AT3G23050.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp028638 not found in 503aa AT3G23050.1 1st_1st 0.304347826 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G23050.1     --------------------MIGQL-----------------------------------
pp028638_Pp1s18 MKFSNEVVHKSMNITEDCSALTGALLKYSTDKSNMNFETLYRDAAVESPQHEVSNESGST
                                    : * *                                   

AT3G23050.1     --------------------------------MNLKATELCLGLPG---------GAEA-
pp028638_Pp1s18 LKEHDYFGLSEVSSSNSSSGKQPEKCCREELNLNESATTLQLGPPAAVKPSGHADGADAH
                                                :* .** * ** *.         **:* 

AT3G23050.1     -----VESPAKSAV----------------------------------------------
pp028638_Pp1s18 DEGAGPENPAKRPAHHMQQESLADGRKAAAEMGSFKIQRKNILEEFRAMKAQAHMTKSPK
                      *.*** ..                                              

AT3G23050.1     --------------------------GSKRGFSETV-------------------DLMLN
pp028638_Pp1s18 PVHTMQHNMHASFSGAQMAFGGAKNNGVKRVFSEAVGGNHIAASGVGVGVREGNDDVSRC
                                          * ** ***:*                   *:   

AT3G23050.1     LQSNKEGSVDLK-------------------NVSA-------------------------
pp028638_Pp1s18 EEMNGTEQLDLKVHLPKGMGMARMAPVSGGQNGSAWRNLSFDNMQGPLNPFFRKSLVSKM
                 : *   .:***                   * **                         

AT3G23050.1     -VP--------------KEKTTLKDPS--KPPAKAQVVGWPPVRNYRKNMMTQQKTSSGA
pp028638_Pp1s18 PVPDGGDSSANASNDCANRKGMVASPSVQPPPAQNQTVGWPPVKNFNKMNTPAPPASTPA
                 **              :.*  : .**   ***: *.******:*:.*   .   :*: *

AT3G23050.1     EE--------ASSEKAGNFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKM
pp028638_Pp1s18 RACPSVQRKGASTSSSGN---------LVKIYMDGVPFGRKVDLKTNDSYDKLYSMLEDM
                .         **:..:**         ***: ***.*: ******  .**:.* . * .*

AT3G23050.1     FSSFTMGNY-----GAQGMIDFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFV
pp028638_Pp1s18 FQQYISGQYCGGRSSSSGESHWVASSRKLNFLEGSEYVLIYEDHEGDSMLVGDVPWELFV
                *..:  *:*     .:.*  .:: .*: :*:*:.****  ***::** *********:**

AT3G23050.1     ESCKRLRIMKGSEAVGLAPRAMEKYCKNRS---------
pp028638_Pp1s18 NAVKRLRIMKGSEQVNLAP-------KNADPTKVQVAVG
                :: ********** *.***       ** .
BoxShade v3.31 C (beta, 970507) Output
AT3G23050.1     - - - - - - - - - - - - - - - - - - - - M I G Q L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp028638_Pp1s18    M K F S N E V V H K S M N I T E D C S A L T G A L L K Y S T D K S N M N F E T L Y R D A A V E S P Q H E V S N E S G S T
 
AT3G23050.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M N L K A T E L C L G L P G - - - - - - - - - G A E A -
pp028638_Pp1s18    L K E H D Y F G L S E V S S S N S S S G K Q P E K C C R E E L N L N E S A T T L Q L G P P A A V K P S G H A D G A D A H
 
AT3G23050.1     - - - - - V E S P A K S A V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp028638_Pp1s18    D E G A G P E N P A K R P A H H M Q Q E S L A D G R K A A A E M G S F K I Q R K N I L E E F R A M K A Q A H M T K S P K
 
AT3G23050.1     - - - - - - - - - - - - - - - - - - - - - - - - - - G S K R G F S E T V - - - - - - - - - - - - - - - - - - - D L M L N
pp028638_Pp1s18    P V H T M Q H N M H A S F S G A Q M A F G G A K N N G V K R V F S E A V G G N H I A A S G V G V G V R E G N D D V S R C
 
AT3G23050.1     L Q S N K E G S V D L K - - - - - - - - - - - - - - - - - - - N V S A - - - - - - - - - - - - - - - - - - - - - - - - -
pp028638_Pp1s18    E E M N G T E Q L D L K V H L P K G M G M A R M A P V S G G Q N G S A W R N L S F D N M Q G P L N P F F R K S L V S K M
 
AT3G23050.1     - V P - - - - - - - - - - - - - - K E K T T L K D P S - - K P P A K A Q V V G W P P V R N Y R K N M M T Q Q K T S S G A
pp028638_Pp1s18    P V P D G G D S S A N A S N D C A N R K G M V A S P S V Q P P P A Q N Q T V G W P P V K N F N K M N T P A P P A S T P A
 
AT3G23050.1     E E - - - - - - - - A S S E K A G N F G G G A A G A G L V K V S M D G A P Y L R K V D L K M Y K S Y Q D L S D A L A K M
pp028638_Pp1s18    R A C P S V Q R K G A S T S S S G N - - - - - - - - - L V K I Y M D G V P F G R K V D L K T N D S Y D K L Y S M L E D M
 
AT3G23050.1     F S S F T M G N Y - - - - - G A Q G M I D F M N E S K L M N L L N S S E Y V P S Y E D K D G D W M L V G D V P W E M F V
pp028638_Pp1s18    F Q Q Y I S G Q Y C G G R S S S S G E S H W V A S S R K L N F L E G S E Y V L I Y E D H E G D S M L V G D V P W E L F V
 
AT3G23050.1     E S C K R L R I M K G S E A V G L A P R A M E K Y C K N R S - - - - - - - - -
pp028638_Pp1s18    N A V K R L R I M K G S E Q V N L A P - - - - - - - K N A D P T K V Q V A V G
 
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