fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23050.1 NLKATELCLGLPGGAE at 11/210 in AT3G23050.2
FSETVDLMLNLQSNKE at 42/210 in AT3G23050.2
NLKATELCLGLPGGAE at 11/243 in AT3G23050.1
FSETVDLMLNLQSNKE at 42/243 in AT3G23050.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os041779 AFEATELRLGLPGGGG in 11/277 AT3G23050.1 1st_1st 0.569794050 Ia
FAETIDLKLKLEPAAA in 44/277
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G23050.1     MIGQLMNLKATELCLGLPGG---AEAVESPAKSAVGSKRGFSETVDLMLNLQ--------
Os041779_Os12t0 MAADLA-FEATELRLGLPGGGGDGDAAAAAARSSSG-KRGFAETIDLKLKLEPAAAAVDD
                * .:*  ::**** ******   .:*. :.*:*: * ****:**:** *:*:        

AT3G23050.1     ---------SNKEGSVDL---KNVSAVPKEK----------------TTLKDPSKPPA-K
Os041779_Os12t0 DDDKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRAPK
                         .::* .**:   .* .* *                   *:  **.** * *

AT3G23050.1     AQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLRKV
Os041779_Os12t0 AQVVGWPPVRSYRKNILAVQ--ADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKV
                **********.****::: *  :. .::*:.  ..: *.***.*.:**************

AT3G23050.1     DLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLNSSEYVPSYEDKDGD
Os041779_Os12t0 DLKMYKSYLELSKALEKMFSSFTIGNCGSHG-VNGMNESKIADLLNGSEYVPTYEDKDGD
                ******** :**.** *******:** *::* :: *****: :***.*****:*******

AT3G23050.1     WMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEKYCKNRS
Os041779_Os12t0 WMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEK-CKNRS
                ***************************:********* *****
BoxShade v3.31 C (beta, 970507) Output
AT3G23050.1     M I G Q L M N L K A T E L C L G L P G G - - - A E A V E S P A K S A V G S K R G F S E T V D L M L N L Q - - - - - - - -
Os041779_Os12t0    M A A D L A - F E A T E L R L G L P G G G G D G D A A A A A A R S S S G - K R G F A E T I D L K L K L E P A A A A V D D
 
AT3G23050.1     - - - - - - - - - S N K E G S V D L - - - K N V S A V P K E K - - - - - - - - - - - - - - - - T T L K D P S K P P A - K
Os041779_Os12t0    D D D K E E A A A D D R E K K V D I V G A D N D D A S P P A A A A A G G M K R S P S Q S S V V T A A A D P E K P R A P K
 
AT3G23050.1     A Q V V G W P P V R N Y R K N M M T Q Q K T S S G A E E A S S E K A G N F G G G A A G A G L V K V S M D G A P Y L R K V
Os041779_Os12t0    A Q V V G W P P V R S Y R K N I L A V Q - - A D K G K D A A D G G G D K S G A G A A A A A F V K V S M D G A P Y L R K V
 
AT3G23050.1     D L K M Y K S Y Q D L S D A L A K M F S S F T M G N Y G A Q G M I D F M N E S K L M N L L N S S E Y V P S Y E D K D G D
Os041779_Os12t0    D L K M Y K S Y L E L S K A L E K M F S S F T I G N C G S H G - V N G M N E S K I A D L L N G S E Y V P T Y E D K D G D
 
AT3G23050.1     W M L V G D V P W E M F V E S C K R L R I M K G S E A V G L A P R A M E K Y C K N R S
Os041779_Os12t0    W M L V G D V P W E M F V E S C K R L R I M K G S E A I G L A P R A M E K - C K N R S
 
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