fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23050.1 NLKATELCLGLPGGAE at 11/210 in AT3G23050.2
FSETVDLMLNLQSNKE at 42/210 in AT3G23050.2
NLKATELCLGLPGGAE at 11/243 in AT3G23050.1
FSETVDLMLNLQSNKE at 42/243 in AT3G23050.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031861 not found in 502aa AT3G04730.1 1st_not 0.576659038 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G23050.1     MIGQLMNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNL------------
Sb031861_Sorbi1 ------------LDEHLPRHV-ADEHPVAVLVLVGRHVLGAVEQIHQLALVHAVHPLRPT
                            *   **  . * * *.   *   * .  :*: : :*            

AT3G23050.1     QSNKEGSVDLKN------VSAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKT
Sb031861_Sorbi1 ASNGEGAEHLLERLGQLLVALVHLE----------------VHLAQVRRAVQAHLHERRT
                 ** **: .* :      *: *  *                *  . **.  :  : :::*

AT3G23050.1     SSGAEEASSEKAGNFGGGAAGAGLV------------------KVSMDGAPYLRKVDLKM
Sb031861_Sorbi1 TA----SCRRRRGLVGVFAAAGALVGLHGHDVLPERPDRWPSHHLSLGGARLLGGVSL--
                ::    :. .: * .*  **...**                  ::*:.**  *  *.*  

AT3G23050.1     YKSYQDLSDALAK-----------------------------MFSSFTMGNYGA------
Sb031861_Sorbi1 HGGGGD-DAALARGPLHLPADGGLLRGGHAAGVFLGGGNTVLMLVRLRRLQYGRGSRRLQ
                : .  * . ***:                             *:  :   :**       

AT3G23050.1     -QGMIDFMNESKL------------------------MNLLN---------------SSE
Sb031861_Sorbi1 LQLEVDGLCEAPLPGGDDRAPPFADHLSPAAGQAQTELRLLEPQVRRRHCCCRRHWPSSS
                 *  :* : *: *                        :.**:               **.

AT3G23050.1     -------YVPSY----------EDKDGDWMLVGDVPWEMFVESCKRLRIMKG---SEAVG
Sb031861_Sorbi1 PLGSRLLLLPCFCFVCFALLASQDEEAGWL-------------CK----CKGGGFANARG
                        :*.:          :*::..*:             **     **   ::* *

AT3G23050.1     LAPRAMEKYCKNRS
Sb031861_Sorbi1 LGRGATTT------
                *.  *  .
BoxShade v3.31 C (beta, 970507) Output
AT3G23050.1     M I G Q L M N L K A T E L C L G L P G G A E A V E S P A K S A V G S K R G F S E T V D L M L N L - - - - - - - - - - - -
Sb031861_Sorbi1    - - - - - - - - - - - - L D E H L P R H V - A D E H P V A V L V L V G R H V L G A V E Q I H Q L A L V H A V H P L R P T
 
AT3G23050.1     Q S N K E G S V D L K N - - - - - - V S A V P K E K T T L K D P S K P P A K A Q V V G W P P V R N Y R K N M M T Q Q K T
Sb031861_Sorbi1    A S N G E G A E H L L E R L G Q L L V A L V H L E - - - - - - - - - - - - - - - - V H L A Q V R R A V Q A H L H E R R T
 
AT3G23050.1     S S G A E E A S S E K A G N F G G G A A G A G L V - - - - - - - - - - - - - - - - - - K V S M D G A P Y L R K V D L K M
Sb031861_Sorbi1    T A - - - - S C R R R R G L V G V F A A A G A L V G L H G H D V L P E R P D R W P S H H L S L G G A R L L G G V S L - -
 
AT3G23050.1     Y K S Y Q D L S D A L A K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M F S S F T M G N Y G A - - - - - -
Sb031861_Sorbi1    H G G G G D - D A A L A R G P L H L P A D G G L L R G G H A A G V F L G G G N T V L M L V R L R R L Q Y G R G S R R L Q
 
AT3G23050.1     - Q G M I D F M N E S K L - - - - - - - - - - - - - - - - - - - - - - - - M N L L N - - - - - - - - - - - - - - - S S E
Sb031861_Sorbi1    L Q L E V D G L C E A P L P G G D D R A P P F A D H L S P A A G Q A Q T E L R L L E P Q V R R R H C C C R R H W P S S S
 
AT3G23050.1     - - - - - - - Y V P S Y - - - - - - - - - - E D K D G D W M L V G D V P W E M F V E S C K R L R I M K G - - - S E A V G
Sb031861_Sorbi1    P L G S R L L L L P C F C F V C F A L L A S Q D E E A G W L - - - - - - - - - - - - - C K - - - - C K G G G F A N A R G
 
AT3G23050.1     L A P R A M E K Y C K N R S
Sb031861_Sorbi1    L G R G A T T T - - - - - -
 
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