fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23050.1 NLKATELCLGLPGGAE at 11/210 in AT3G23050.2
FSETVDLMLNLQSNKE at 42/210 in AT3G23050.2
NLKATELCLGLPGGAE at 11/243 in AT3G23050.1
FSETVDLMLNLQSNKE at 42/243 in AT3G23050.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm026657 VFEETELRLGLRLGLP in 7/248 AT3G23050.1 not_1st 0.627002288 II
ETTSVDLMLNLSPKEA in 50/248
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G23050.1     MIGQLMNLKATE----LCLGLPGGAEAVESPAKSAVG-SKRGFSET-------VDLMLNL
gm026657_Glyma1 -----MVFEETELRLGLRLGLPGNGAAPTTEAAAELGVRKRGFSETETDETTSVDLMLNL
                     * :: **    * *****.. *  : * : :*  *******       *******

AT3G23050.1     Q-------SNKEGSVDLKNVSAVPKEKT-TLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQ
gm026657_Glyma1 SPKEASAAATTDGADPRENPKTSPKEKNLPLLDPAKPPAKAQVVGWPPVRSFRKNMFAAQ
                .       :..:*:   :* .: ****. .* **:***************.:****:: *

AT3G23050.1     KTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFS
gm026657_Glyma1 KSSGGEE---SEK------NSPNASFVKVSMDGAPYLRKVDLKMYKSYPELSDALGKMFS
                *:*.* *   ***      .:..*.:********************** :*****.****

AT3G23050.1     SFTMGNYGAQGMIDFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLR
gm026657_Glyma1 SFTIGNCESQGFKDFMNESKLMDLLNSSDYVPTYEDRDGDWMLVGDVPWEMFVESCKRLR
                ***:**  :**: *********:*****:***:***:***********************

AT3G23050.1     IMKGSEAVGLAPRAMEKYCKNRS
gm026657_Glyma1 IMKGKEAIGLAPRAVEK-CKNRS
                ****.**:******:** *****
BoxShade v3.31 C (beta, 970507) Output
AT3G23050.1     M I G Q L M N L K A T E - - - - L C L G L P G G A E A V E S P A K S A V G - S K R G F S E T - - - - - - - V D L M L N L
gm026657_Glyma1    - - - - - M V F E E T E L R L G L R L G L P G N G A A P T T E A A A E L G V R K R G F S E T E T D E T T S V D L M L N L
 
AT3G23050.1     Q - - - - - - - S N K E G S V D L K N V S A V P K E K T - T L K D P S K P P A K A Q V V G W P P V R N Y R K N M M T Q Q
gm026657_Glyma1    S P K E A S A A A T T D G A D P R E N P K T S P K E K N L P L L D P A K P P A K A Q V V G W P P V R S F R K N M F A A Q
 
AT3G23050.1     K T S S G A E E A S S E K A G N F G G G A A G A G L V K V S M D G A P Y L R K V D L K M Y K S Y Q D L S D A L A K M F S
gm026657_Glyma1    K S S G G E E - - - S E K - - - - - - N S P N A S F V K V S M D G A P Y L R K V D L K M Y K S Y P E L S D A L G K M F S
 
AT3G23050.1     S F T M G N Y G A Q G M I D F M N E S K L M N L L N S S E Y V P S Y E D K D G D W M L V G D V P W E M F V E S C K R L R
gm026657_Glyma1    S F T I G N C E S Q G F K D F M N E S K L M D L L N S S D Y V P T Y E D R D G D W M L V G D V P W E M F V E S C K R L R
 
AT3G23050.1     I M K G S E A V G L A P R A M E K Y C K N R S
gm026657_Glyma1    I M K G K E A I G L A P R A V E K - C K N R S
 
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