Input
| Putative repression domain
|
|
AT3G23130.1 |
NESEQDLDLELRLGFA at 193/204 in AT3G23130.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt043316 |
SDSKDDLDLELRLGSL in 204/215 |
AT3G23130.1 |
1st_1st |
0.326732673 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G23130.1 MER---SNSIELRNSFYGRA----------RTSPWSYGDYDNCQQD-HDYLLGFSWPPRS
pt043316_POPTR_ MERNSLSSNVNGHSNIGSRACNNNDKKKKLRDS-W---NFSSCQSNGHDYLGGLSWPPRS
*** *..:: :..: .** * * * ::..**.: **** *:******
AT3G23130.1 YTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYP----------NPN
pt043316_POPTR_ YTCTFCKREFKSAQALGGHMNVHRRDRARLRL----------SPPRDDQCPILTLNLNPN
***:******:********************* *** ***
AT3G23130.1 YSYSTMANSPPPHHSPLTLFPTLSPPSSP-------RYRAGLIRSLSPKSKHTPE-NACK
pt043316_POPTR_ PSFCTPFNRTIPS----LVSPPLTAPSTPSLASEVKKWTIGGGNPLDPSSPNLSDLTTNR
*:.* * . * : *.*:.**:* :: * ..*.*.* : .: .: :
AT3G23130.1 TKKSSLLVEAGEATRFTSKDACKILRNDEIISLELEIGLINESEQDLDLELRLGFA-
pt043316_POPTR_ SRKSFFENFDG----FTRQDGFKIWNKGEIVRLDLDIGLVSDSKDDLDLELRLGSLN
::** : * ** :*. ** .:.**: *:*:***:.:*::*********
BoxShade v3.31 C (beta, 970507) Output
AT3G23130.1 |
M |
E |
R |
- |
- |
- |
S |
N |
S |
I |
E |
L |
R |
N |
S |
F |
Y |
G |
R |
A |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
R |
T |
S |
P |
W |
S |
Y |
G |
D |
Y |
D |
N |
C |
Q |
Q |
D |
- |
H |
D |
Y |
L |
L |
G |
F |
S |
W |
P |
P |
R |
S |
pt043316_POPTR_ |
M |
E |
R |
N |
S |
L |
S |
S |
N |
V |
N |
G |
H |
S |
N |
I |
G |
S |
R |
A |
C |
N |
N |
N |
D |
K |
K |
K |
K |
L |
R |
D |
S |
- |
W |
- |
- |
- |
N |
F |
S |
S |
C |
Q |
S |
N |
G |
H |
D |
Y |
L |
G |
G |
L |
S |
W |
P |
P |
R |
S |
|
AT3G23130.1 |
Y |
T |
C |
S |
F |
C |
K |
R |
E |
F |
R |
S |
A |
Q |
A |
L |
G |
G |
H |
M |
N |
V |
H |
R |
R |
D |
R |
A |
R |
L |
R |
L |
Q |
Q |
S |
P |
S |
S |
S |
S |
T |
P |
S |
P |
P |
Y |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
N |
P |
N |
pt043316_POPTR_ |
Y |
T |
C |
T |
F |
C |
K |
R |
E |
F |
K |
S |
A |
Q |
A |
L |
G |
G |
H |
M |
N |
V |
H |
R |
R |
D |
R |
A |
R |
L |
R |
L |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
P |
P |
R |
D |
D |
Q |
C |
P |
I |
L |
T |
L |
N |
L |
N |
P |
N |
|
AT3G23130.1 |
Y |
S |
Y |
S |
T |
M |
A |
N |
S |
P |
P |
P |
H |
H |
S |
P |
L |
T |
L |
F |
P |
T |
L |
S |
P |
P |
S |
S |
P |
- |
- |
- |
- |
- |
- |
- |
R |
Y |
R |
A |
G |
L |
I |
R |
S |
L |
S |
P |
K |
S |
K |
H |
T |
P |
E |
- |
N |
A |
C |
K |
pt043316_POPTR_ |
P |
S |
F |
C |
T |
P |
F |
N |
R |
T |
I |
P |
S |
- |
- |
- |
- |
L |
V |
S |
P |
P |
L |
T |
A |
P |
S |
T |
P |
S |
L |
A |
S |
E |
V |
K |
K |
W |
T |
I |
G |
G |
G |
N |
P |
L |
D |
P |
S |
S |
P |
N |
L |
S |
D |
L |
T |
T |
N |
R |
|
AT3G23130.1 |
T |
K |
K |
S |
S |
L |
L |
V |
E |
A |
G |
E |
A |
T |
R |
F |
T |
S |
K |
D |
A |
C |
K |
I |
L |
R |
N |
D |
E |
I |
I |
S |
L |
E |
L |
E |
I |
G |
L |
I |
N |
E |
S |
E |
Q |
D |
L |
D |
L |
E |
L |
R |
L |
G |
F |
A |
- |
pt043316_POPTR_ |
S |
R |
K |
S |
F |
F |
E |
N |
F |
D |
G |
- |
- |
- |
- |
F |
T |
R |
Q |
D |
G |
F |
K |
I |
W |
N |
K |
G |
E |
I |
V |
R |
L |
D |
L |
D |
I |
G |
L |
V |
S |
D |
S |
K |
D |
D |
L |
D |
L |
E |
L |
R |
L |
G |
S |
L |
N |
|
|