fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23130.1 NESEQDLDLELRLGFA at 193/204 in AT3G23130.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt043316 SDSKDDLDLELRLGSL in 204/215 AT3G23130.1 1st_1st 0.326732673 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G23130.1     MER---SNSIELRNSFYGRA----------RTSPWSYGDYDNCQQD-HDYLLGFSWPPRS
pt043316_POPTR_ MERNSLSSNVNGHSNIGSRACNNNDKKKKLRDS-W---NFSSCQSNGHDYLGGLSWPPRS
                ***   *..:: :..: .**          * * *   ::..**.: **** *:******

AT3G23130.1     YTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYP----------NPN
pt043316_POPTR_ YTCTFCKREFKSAQALGGHMNVHRRDRARLRL----------SPPRDDQCPILTLNLNPN
                ***:******:*********************          ***            ***

AT3G23130.1     YSYSTMANSPPPHHSPLTLFPTLSPPSSP-------RYRAGLIRSLSPKSKHTPE-NACK
pt043316_POPTR_ PSFCTPFNRTIPS----LVSPPLTAPSTPSLASEVKKWTIGGGNPLDPSSPNLSDLTTNR
                 *:.*  * . *      : *.*:.**:*       ::  *  ..*.*.* : .: .: :

AT3G23130.1     TKKSSLLVEAGEATRFTSKDACKILRNDEIISLELEIGLINESEQDLDLELRLGFA-
pt043316_POPTR_ SRKSFFENFDG----FTRQDGFKIWNKGEIVRLDLDIGLVSDSKDDLDLELRLGSLN
                ::** :    *    ** :*. ** .:.**: *:*:***:.:*::*********
BoxShade v3.31 C (beta, 970507) Output
AT3G23130.1     M E R - - - S N S I E L R N S F Y G R A - - - - - - - - - - R T S P W S Y G D Y D N C Q Q D - H D Y L L G F S W P P R S
pt043316_POPTR_    M E R N S L S S N V N G H S N I G S R A C N N N D K K K K L R D S - W - - - N F S S C Q S N G H D Y L G G L S W P P R S
 
AT3G23130.1     Y T C S F C K R E F R S A Q A L G G H M N V H R R D R A R L R L Q Q S P S S S S T P S P P Y P - - - - - - - - - - N P N
pt043316_POPTR_    Y T C T F C K R E F K S A Q A L G G H M N V H R R D R A R L R L - - - - - - - - - - S P P R D D Q C P I L T L N L N P N
 
AT3G23130.1     Y S Y S T M A N S P P P H H S P L T L F P T L S P P S S P - - - - - - - R Y R A G L I R S L S P K S K H T P E - N A C K
pt043316_POPTR_    P S F C T P F N R T I P S - - - - L V S P P L T A P S T P S L A S E V K K W T I G G G N P L D P S S P N L S D L T T N R
 
AT3G23130.1     T K K S S L L V E A G E A T R F T S K D A C K I L R N D E I I S L E L E I G L I N E S E Q D L D L E L R L G F A -
pt043316_POPTR_    S R K S F F E N F D G - - - - F T R Q D G F K I W N K G E I V R L D L D I G L V S D S K D D L D L E L R L G S L N
 
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