fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os034953 not found in 131aa AT5G43410.1 1st_not 0.462365591 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G23220.1     MERIESYNTNE----MKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDR
Os034953_Os09t0 MDHHHQQQQQEGELVAKYRGVRRRPWGKFAAEIRDSSRHGVRVWLGTFDTAEEAARAYDR
                *:: .. : :*     ******:*****:*******:***.*******:***:*******

AT3G23220.1     AAFGMRGQRAILNFP---HEY--QMMKDGPNGSHENAVASSSSGYRGGGGGDDGREVIEF
Os034953_Os09t0 SAYSMRGANAVLNFPADAHIYARQL--------HNNNAAAGSSSSSSAAAAAARPPPIEF
                :*:.*** .*:****   * *  *:        *:* .*:.**.  .....      ***

AT3G23220.1     EYLDDSLLEELLDYGERSNQDNCNDANR
Os034953_Os09t0 EYLDDHVLQEML-------RDHTTNK--
                ***** :*:*:*       :*: .:
BoxShade v3.31 C (beta, 970507) Output
AT3G23220.1     M E R I E S Y N T N E - - - - M K Y R G V R K R P W G K Y A A E I R D S A R H G A R V W L G T F N T A E D A A R A Y D R
Os034953_Os09t0    M D H H H Q Q Q Q Q E G E L V A K Y R G V R R R P W G K F A A E I R D S S R H G V R V W L G T F D T A E E A A R A Y D R
 
AT3G23220.1     A A F G M R G Q R A I L N F P - - - H E Y - - Q M M K D G P N G S H E N A V A S S S S G Y R G G G G G D D G R E V I E F
Os034953_Os09t0    S A Y S M R G A N A V L N F P A D A H I Y A R Q L - - - - - - - - H N N N A A A G S S S S S S A A A A A A R P P P I E F
 
AT3G23220.1     E Y L D D S L L E E L L D Y G E R S N Q D N C N D A N R
Os034953_Os09t0    E Y L D D H V L Q E M L - - - - - - - R D H T T N K - -
 
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