fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb008747 not found in 180aa AT2G44840.1 1st_not 0.462365591 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G23220.1     ------------------------------MERI---------------ESYN-------
Sb008747_Sorbi1 MGMGTSLSLASAAAAAHGHGQYLPLNEDDSLEMVLFDVLREASGSAAAPTTYQPPASSLP
                                              :* :                :*:       

AT3G23220.1     ---------------------------------TNEMKYRGVRKRPWGKYAAEIRDSARH
Sb008747_Sorbi1 TLKKALASGAAARKGGGGGVGCSSRAAHAPKAATTGRHYRGVRRRPWGKYAAEIRDPARH
                                                 *.  :*****:************.***

AT3G23220.1     GARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFPHEYQMMKDGPN----GSHENAVAS
Sb008747_Sorbi1 GARLWLGTFATAEEAAAAYDRAAFRMRGAKALLNFP---------PAVAGCGNAATATAE
                ***:***** ***:** ******* *** :*:****         *     *.  .*.*.

AT3G23220.1     SSSGYRGGGGGDDGREVIEFEYLDDSLLEELLDYGERSNQDNCNDANR
Sb008747_Sorbi1 QAAG------------VTEAK---------------------------
                .::*            * * :
BoxShade v3.31 C (beta, 970507) Output
AT3G23220.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E R I - - - - - - - - - - - - - - - E S Y N - - - - - - -
Sb008747_Sorbi1    M G M G T S L S L A S A A A A A H G H G Q Y L P L N E D D S L E M V L F D V L R E A S G S A A A P T T Y Q P P A S S L P
 
AT3G23220.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T N E M K Y R G V R K R P W G K Y A A E I R D S A R H
Sb008747_Sorbi1    T L K K A L A S G A A A R K G G G G G V G C S S R A A H A P K A A T T G R H Y R G V R R R P W G K Y A A E I R D P A R H
 
AT3G23220.1     G A R V W L G T F N T A E D A A R A Y D R A A F G M R G Q R A I L N F P H E Y Q M M K D G P N - - - - G S H E N A V A S
Sb008747_Sorbi1    G A R L W L G T F A T A E E A A A A Y D R A A F R M R G A K A L L N F P - - - - - - - - - P A V A G C G N A A T A T A E
 
AT3G23220.1     S S S G Y R G G G G G D D G R E V I E F E Y L D D S L L E E L L D Y G E R S N Q D N C N D A N R
Sb008747_Sorbi1    Q A A G - - - - - - - - - - - - V T E A K - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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