fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041538 not found in 183aa AT5G47220.1 1st_not 0.494623655 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G23220.1     ------MERIES---------------YNTNEMK--------------------------
gm041538_Glyma1 MGSNKTYEEEESTVLFSHSQTQTELLPFNENDPQDMVIYQVLNEANALTNTFLPQRLHQP
                       *. **               :* *: :                          

AT3G23220.1     --------------YRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAF
gm041538_Glyma1 QLCLEPTRNITKKHYRGVRRRPWGKYAAEIRDSARHGARIWLGTFQTAEEAAMAYDRAAF
                              *****:*******************:*****:***:** *******

AT3G23220.1     GMRGQRAILNFPHEY----QMMKDGPNGSHENAVASSSSGYRGGGGGDDGREVIEFEYLD
gm041538_Glyma1 KMRGSKALLNFPAEIVAATELSFNNTNSNNHDAVSDSSAGS---------------SCTN
                 ***.:*:**** *     ::  :..*..:.:**:.**:*                .  :

AT3G23220.1     DSLLEELLDYGERSNQDNCNDANR
gm041538_Glyma1 NSV--QL----NRNQSESCTSSTG
                :*:  :*    :*.:.:.*..:.
BoxShade v3.31 C (beta, 970507) Output
AT3G23220.1     - - - - - - M E R I E S - - - - - - - - - - - - - - - Y N T N E M K - - - - - - - - - - - - - - - - - - - - - - - - - -
gm041538_Glyma1    M G S N K T Y E E E E S T V L F S H S Q T Q T E L L P F N E N D P Q D M V I Y Q V L N E A N A L T N T F L P Q R L H Q P
 
AT3G23220.1     - - - - - - - - - - - - - - Y R G V R K R P W G K Y A A E I R D S A R H G A R V W L G T F N T A E D A A R A Y D R A A F
gm041538_Glyma1    Q L C L E P T R N I T K K H Y R G V R R R P W G K Y A A E I R D S A R H G A R I W L G T F Q T A E E A A M A Y D R A A F
 
AT3G23220.1     G M R G Q R A I L N F P H E Y - - - - Q M M K D G P N G S H E N A V A S S S S G Y R G G G G G D D G R E V I E F E Y L D
gm041538_Glyma1    K M R G S K A L L N F P A E I V A A T E L S F N N T N S N N H D A V S D S S A G S - - - - - - - - - - - - - - - S C T N
 
AT3G23220.1     D S L L E E L L D Y G E R S N Q D N C N D A N R
gm041538_Glyma1    N S V - - Q L - - - - N R N Q S E S C T S S T G
 
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