fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035968 not found in 148aa AT3G23230.1 not_1st 0.613207547 II
Pt038177 not found in 142aa AT3G23230.1 not_1st 0.580188679 II
Pt000131 not found in 143aa AT3G23230.1 not_1st 0.547169811 II
Pt042320 not found in 138aa AT3G23230.1 not_1st 0.537735849 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G23230.1     --MESSNRSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAAR
pt042320_POPTR_ ---MDGDRTKSKDGGG--EVKYRGVRKRPWGKFAAEIRDSTRHGARVWLGTFNTAEEAAR
pt035968_POPTR_ --MEEPDKGKEKELKGREEVRYRGVRRRPWGKFAAEIRDPSRQGARLWLGTFDTAEEAAR
pt000131_POPTR_ METHQGEKNTKKQEKGRGENAYRGIRRRPWGKFAAEIRDPTKNGARRWLGTYDTAEEAAR
pt038177_POPTR_ METYQGEKNTKKQEK-RRENAYRGIRRRPWGKFAAEIRDPTRNGTRRWLGTFDTAEEAAR
                    . :: ..::     :  :**:*:************.:::*:* ****::*******

AT3G23230.1     AYDRAAFNLRGHLAILNFPNEYY-------PRMDDYSLRPPYASSSS---SSSSGSTSTN
pt042320_POPTR_ AYDRAAYAMRGHLAILNFSNEY--------PNMAG---SASVGSSGSTPYFSSGYSGPSS
pt035968_POPTR_ AYDRAAFSMRGHLAILNFPNDYLSQAIGSSPR------RPPVSSSSSDVGASESFQRGSS
pt000131_POPTR_ AYDRAAFAFRGHLAILNFPNEYQHQD----PSS-----AMSFASSSS-FSTANPVNYGHE
pt038177_POPTR_ AYDRAAFAFRGHLAILNFPNEYQHQE----TNS-----TMSFASSSS-FSTENPLSYGNE
                ******: :*********.*:*        .         . .**.*     .  .   .

AT3G23230.1     VSRQNQREVFEFEYLDDKVLEELLDSEERKR-----
pt042320_POPTR_ SSPSMLREVFEFECLDDKLLEEMLEQEEKKSKKN--
pt035968_POPTR_ SSAGQGKQVIEFEYLDDKILEELLETEEEKKKRQQD
pt000131_POPTR_ VSSTGGQEVIEFEYLDNKLLEELLGTNDPSRQH---
pt038177_POPTR_ VSSTNGQEVIEFEYLDNKLLEELLETDDHSRQL---
                 *    ::*:*** **:*:***:*  :: .
BoxShade v3.31 C (beta, 970507) Output
AT3G23230.1     - - M E S S N R S S N N Q S Q D D K Q A R F R G V R R R P W G K F A A E I R D P S R N G A R L W L G T F E T A E E A A R
pt042320_POPTR_    - - - M D G D R T K S K D G G G - - E V K Y R G V R K R P W G K F A A E I R D S T R H G A R V W L G T F N T A E E A A R
pt035968_POPTR_    - - M E E P D K G K E K E L K G R E E V R Y R G V R R R P W G K F A A E I R D P S R Q G A R L W L G T F D T A E E A A R
pt000131_POPTR_    M E T H Q G E K N T K K Q E K G R G E N A Y R G I R R R P W G K F A A E I R D P T K N G A R R W L G T Y D T A E E A A R
pt038177_POPTR_    M E T Y Q G E K N T K K Q E K - R R E N A Y R G I R R R P W G K F A A E I R D P T R N G T R R W L G T F D T A E E A A R
 
AT3G23230.1     A Y D R A A F N L R G H L A I L N F P N E Y Y - - - - - - - P R M D D Y S L R P P Y A S S S S - - - S S S S G S T S T N
pt042320_POPTR_    A Y D R A A Y A M R G H L A I L N F S N E Y - - - - - - - - P N M A G - - - S A S V G S S G S T P Y F S S G Y S G P S S
pt035968_POPTR_    A Y D R A A F S M R G H L A I L N F P N D Y L S Q A I G S S P R - - - - - - R P P V S S S S S D V G A S E S F Q R G S S
pt000131_POPTR_    A Y D R A A F A F R G H L A I L N F P N E Y Q H Q D - - - - P S S - - - - - A M S F A S S S S - F S T A N P V N Y G H E
pt038177_POPTR_    A Y D R A A F A F R G H L A I L N F P N E Y Q H Q E - - - - T N S - - - - - T M S F A S S S S - F S T E N P L S Y G N E
 
AT3G23230.1     V S R Q N Q R E V F E F E Y L D D K V L E E L L D S E E R K R - - - - -
pt042320_POPTR_    S S P S M L R E V F E F E C L D D K L L E E M L E Q E E K K S K K N - -
pt035968_POPTR_    S S A G Q G K Q V I E F E Y L D D K I L E E L L E T E E E K K K R Q Q D
pt000131_POPTR_    V S S T G G Q E V I E F E Y L D N K L L E E L L G T N D P S R Q H - - -
pt038177_POPTR_    V S S T N G Q E V I E F E Y L D N K L L E E L L E T D D H S R Q L - - -
 
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