fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os016553 not found in 128aa AT5G43410.1 1st_not 0.429245283 II
Os011241 not found in 141aa AT3G23230.1 not_1st 0.419811320 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G23230.1     MESSNRSSNNQSQDDKQ------ARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAE
Os011241_Os03t0 ME-----------DDKSKEGKSSSSYRGVRKRPWGKFAAEIRDPERGGARVWLGTFDTAE
Os016553_Os04t0 ME-----------DDKK---EAASKYRGVRRRPWGKFAAEIRDPERGGSRVWLGTFDTAE
                **           ***.      : :****:*************.*.*:*:*****:***

AT3G23230.1     EAARAYDRAAFNLRGHLAILNFPNEYYP----RMDDYSLRPPYASSSSSSSSGST---ST
Os011241_Os03t0 EAARAYDRAAFAMKGATAMLNFPGDHHHGAASRM---------TSTGSSSSSFTTPP-PA
Os016553_Os04t0 EAARAYDRAAFAMKGAMAVLNFPG--------RT---------SSTGSSSSSSSTPPAPV
                *********** ::*  *:****.        *          :*:.***** :*   ..

AT3G23230.1     NVS----RQN---QREVFEFEYLDDKVLEELLDSEERKR-----
Os011241_Os03t0 NSSAAAGRGGSDRTTDKVELECLDDKVLEDLLAET-NYRDKNY-
Os016553_Os04t0 TTS----RHCAD-TTEKVELVYLDDKVLDELLAEDYSYRNNNNY
                . *    *       : .*:  ******::** .    *
BoxShade v3.31 C (beta, 970507) Output
AT3G23230.1     M E S S N R S S N N Q S Q D D K Q - - - - - - A R F R G V R R R P W G K F A A E I R D P S R N G A R L W L G T F E T A E
Os011241_Os03t0    M E - - - - - - - - - - - D D K S K E G K S S S S Y R G V R K R P W G K F A A E I R D P E R G G A R V W L G T F D T A E
Os016553_Os04t0    M E - - - - - - - - - - - D D K K - - - E A A S K Y R G V R R R P W G K F A A E I R D P E R G G S R V W L G T F D T A E
 
AT3G23230.1     E A A R A Y D R A A F N L R G H L A I L N F P N E Y Y P - - - - R M D D Y S L R P P Y A S S S S S S S S G S T - - - S T
Os011241_Os03t0    E A A R A Y D R A A F A M K G A T A M L N F P G D H H H G A A S R M - - - - - - - - - T S T G S S S S S F T T P P - P A
Os016553_Os04t0    E A A R A Y D R A A F A M K G A M A V L N F P G - - - - - - - - R T - - - - - - - - - S S T G S S S S S S S T P P A P V
 
AT3G23230.1     N V S - - - - R Q N - - - Q R E V F E F E Y L D D K V L E E L L D S E E R K R - - - - -
Os011241_Os03t0    N S S A A A G R G G S D R T T D K V E L E C L D D K V L E D L L A E T - N Y R D K N Y -
Os016553_Os04t0    T T S - - - - R H C A D - T T E K V E L V Y L D D K V L D E L L A E D Y S Y R N N N N Y
 
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