fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb001162 not found in 136aa AT5G47230.1 1st_not 0.433962264 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G23230.1     MESSNRSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAY
Sb001162_Sorbi1 MEGGKDAAGGGG-----TKYRGVRKRPWGKFAAEIRDPERGGARVWLGTFDTAEEAARAY
                **..: ::.. .     :::****:*************.*.***:*****:*********

AT3G23230.1     DRAAFNLRGHLAILNFPNEYYPRMDDYSLRPPYASSSSSSSSGSTSTNVS--RQNQR---
Sb001162_Sorbi1 DRAAFAQRGATAVLNFPGE----IAGATRRGAGGSSSSSSAAAAAAPAAASLRATGRGRG
                *****  **  *:****.*    : . : * . .******::.:::. .:  * . *   

AT3G23230.1     --EVFEFEYLDDKVLEELLDSEERKR
Sb001162_Sorbi1 DGEKIELECLDDKILEDLLDDGKYG-
                  * :*:* ****:**:***. :
BoxShade v3.31 C (beta, 970507) Output
AT3G23230.1     M E S S N R S S N N Q S Q D D K Q A R F R G V R R R P W G K F A A E I R D P S R N G A R L W L G T F E T A E E A A R A Y
Sb001162_Sorbi1    M E G G K D A A G G G G - - - - - T K Y R G V R K R P W G K F A A E I R D P E R G G A R V W L G T F D T A E E A A R A Y
 
AT3G23230.1     D R A A F N L R G H L A I L N F P N E Y Y P R M D D Y S L R P P Y A S S S S S S S S G S T S T N V S - - R Q N Q R - - -
Sb001162_Sorbi1    D R A A F A Q R G A T A V L N F P G E - - - - I A G A T R R G A G G S S S S S S A A A A A A P A A A S L R A T G R G R G
 
AT3G23230.1     - - E V F E F E Y L D D K V L E E L L D S E E R K R
Sb001162_Sorbi1    D G E K I E L E C L D D K I L E D L L D D G K Y G -
 
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