fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G23230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm055290 not found in 134aa AT3G23230.1 not_1st 0.584905660 II
Gm035754 not found in 153aa AT3G23230.1 not_1st 0.523584905 II
Gm042339 not found in 132aa AT3G23230.1 not_1st 0.523584905 II
Gm026693 not found in 137aa AT3G23230.1 not_1st 0.514150943 II
Gm035749 not found in 138aa AT3G23230.1 not_1st 0.509433962 II
Gm026695 not found in 158aa AT3G23230.1 not_1st 0.509433962 II
Gm002627 not found in 157aa AT3G23230.1 not_1st 0.495283018 II
Gm007220 not found in 153aa AT3G23230.1 not_1st 0.490566037 II
Gm024138 not found in 132aa AT3G23230.1 not_1st 0.485849056 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G23230.1     MESSN----RSSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEA
gm026693_Glyma1 MEEES----KE-KRDTKG--EPRYRGVRRRPWGKFAAEIRDPARHGARVWLGTFLTAEEA
gm035749_Glyma1 MEEES----KEKKKDTKE--EPRYRGVRRRPWGKFAAEIRDPARHGARVWLGTFLTAEEA
gm035754_Glyma1 MEGGR----SSASNG---NCEVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQA
gm055290_Glyma2 MEEHQ----KAGKLQGKE--EVRYRGVRRRPWGKYAAEIRDPSKQGSRLWLGTFDTAEEA
gm002627_Glyma0 MDEEGGSRVKANKDEDQE--HVKYRGVRRRPWGKFAAEIRDSMRQGQRLWLGTFNTAEEA
gm024138_Glyma0 MEEAH----KGDEDKEKRGEEVKYRGVRRRPWGKFGAEIRDPTKPTGRQWLGTFDTAEEA
gm042339_Glyma1 MEEAH----KGEQDKEKGGEEVKYRGVRRRPWGKFGAEIRDPTKSTGRQWLGTFDTAEEA
gm007220_Glyma0 MEGGR-----GVVNGNPSNADVRYRGIRRRPWGKFAAEIRDPTRKGARIWLGTFDTAEQA
gm026695_Glyma1 MEGGR----SSVSNG---NVEVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQA
                *:                  . ::**:*******:.*****. :   * ***** ***:*

AT3G23230.1     ARAYDRAAFNLRGHLAILNFPNEYYPRMDD--------YSLRPPYAS-------SSSSSS
gm026693_Glyma1 ARAYDRAAYEMRGALAVLNFPNEY------------------PSCSSMSSSSTLAPSSSS
gm035749_Glyma1 ARAYDRAAYEMRGALAVLNFPNEY------------------PSCSSMNSSSTLAPSSSS
gm035754_Glyma1 ARAYDAAAFHFRGHRAILNFPNEYQSHNPN-------SSLPMPLIVP--------PPSY-
gm055290_Glyma2 ARAYDRAAFNLRGHLAILNFPSEYYSQIRG--------SPPYPPHLA-------TPSSSS
gm002627_Glyma0 ARAYDRAAYAMRGPFAVLNFPNEYPPLAIG--------ASSSSSSSSSSSSSS-SSSSSS
gm024138_Glyma0 ARAYDRAAIELRGVLAILNFPDECYSQL--------------PFVSS-------NPTSTA
gm042339_Glyma1 ARAYDRAAIELRGALAILNFPDEYYAHL--------------PFVSS-------NPSISS
gm007220_Glyma0 ARAYDAAAFHFRGHKAILNFPNEYGNVTPNPNNNYSSTSLPLPLLSS----------SSS
gm026695_Glyma1 ARAYDAAAFHFRGHRAILNFPNEYQSHNPN-------SSLPMPLAVS-------APPSYS
                ***** **  :**  *:****.*                   .   .             

AT3G23230.1     SGSTSTNV--------------------SRQNQREVFEFEYLDDKVLEELL-DSEERKR-
gm026693_Glyma1 SNSMLKN-----------------------DHGKQVIEFECLDDKLLEDLL-DCDDYAYE
gm035749_Glyma1 SNSMLKS-----------------------DHGKQVIEFECLDDKLLEDLL-DCDDYAYE
gm035754_Glyma1 SSSFTSNYSGDD-NNHLVRP---GEIMQGGDL-DDTFELEYLDNKLLEELL-QMQDNRHF
gm055290_Glyma2 GA-----------------------------QQRPVFEIPCLDDKVLEDLLGQSEEHKKK
gm002627_Glyma0 SSSSSSNAS-------------SASALASPSSTNQVIEFEYFDDKLLEELL-GYEDKNKP
gm024138_Glyma0 NGSSFAP------------------------THKEVIEFECLDNKVLEDLL-ESEVKRRN
gm042339_Glyma1 NGSSYAA------------------------QQKEVIEFECLDNKVLEDLL-ESEVKRRN
gm007220_Glyma0 SSSSFPSYYGEG----------SSQQQQGND--DDTFELECLDNKLLEELL-QQAPDRSG
gm026695_Glyma1 SSSSTSNYSGDDNNNHLVRPAFSGEIMQGGDHDDDTFELEYFDNKLLEELL-QMQDNRHF
                .                                  .:*:  :*:*:**:**         

AT3G23230.1     ------
gm026693_Glyma1 KDLPKN
gm035749_Glyma1 KDLPKN
gm035754_Glyma1 YK----
gm055290_Glyma2 NKGD--
gm002627_Glyma0 DK----
gm024138_Glyma0 ED----
gm042339_Glyma1 ED----
gm007220_Glyma0 N-----
gm026695_Glyma1 ------
BoxShade v3.31 C (beta, 970507) Output
AT3G23230.1     M E S S N - - - - R S S N N Q S Q D D K Q A R F R G V R R R P W G K F A A E I R D P S R N G A R L W L G T F E T A E E A
gm026693_Glyma1    M E E E S - - - - K E - K R D T K G - - E P R Y R G V R R R P W G K F A A E I R D P A R H G A R V W L G T F L T A E E A
gm035749_Glyma1    M E E E S - - - - K E K K K D T K E - - E P R Y R G V R R R P W G K F A A E I R D P A R H G A R V W L G T F L T A E E A
gm035754_Glyma1    M E G G R - - - - S S A S N G - - - N C E V R Y R G I R R R P W G K F A A E I R D P T R K G T R I W L G T F D T A E Q A
gm055290_Glyma2    M E E H Q - - - - K A G K L Q G K E - - E V R Y R G V R R R P W G K Y A A E I R D P S K Q G S R L W L G T F D T A E E A
gm002627_Glyma0    M D E E G G S R V K A N K D E D Q E - - H V K Y R G V R R R P W G K F A A E I R D S M R Q G Q R L W L G T F N T A E E A
gm024138_Glyma0    M E E A H - - - - K G D E D K E K R G E E V K Y R G V R R R P W G K F G A E I R D P T K P T G R Q W L G T F D T A E E A
gm042339_Glyma1    M E E A H - - - - K G E Q D K E K G G E E V K Y R G V R R R P W G K F G A E I R D P T K S T G R Q W L G T F D T A E E A
gm007220_Glyma0    M E G G R - - - - - G V V N G N P S N A D V R Y R G I R R R P W G K F A A E I R D P T R K G A R I W L G T F D T A E Q A
gm026695_Glyma1    M E G G R - - - - S S V S N G - - - N V E V R Y R G I R R R P W G K F A A E I R D P T R K G T R I W L G T F D T A E Q A
 
AT3G23230.1     A R A Y D R A A F N L R G H L A I L N F P N E Y Y P R M D D - - - - - - - - Y S L R P P Y A S - - - - - - - S S S S S S
gm026693_Glyma1    A R A Y D R A A Y E M R G A L A V L N F P N E Y - - - - - - - - - - - - - - - - - - P S C S S M S S S S T L A P S S S S
gm035749_Glyma1    A R A Y D R A A Y E M R G A L A V L N F P N E Y - - - - - - - - - - - - - - - - - - P S C S S M N S S S T L A P S S S S
gm035754_Glyma1    A R A Y D A A A F H F R G H R A I L N F P N E Y Q S H N P N - - - - - - - S S L P M P L I V P - - - - - - - - P P S Y -
gm055290_Glyma2    A R A Y D R A A F N L R G H L A I L N F P S E Y Y S Q I R G - - - - - - - - S P P Y P P H L A - - - - - - - T P S S S S
gm002627_Glyma0    A R A Y D R A A Y A M R G P F A V L N F P N E Y P P L A I G - - - - - - - - A S S S S S S S S S S S S S S - S S S S S S
gm024138_Glyma0    A R A Y D R A A I E L R G V L A I L N F P D E C Y S Q L - - - - - - - - - - - - - - P F V S S - - - - - - - N P T S T A
gm042339_Glyma1    A R A Y D R A A I E L R G A L A I L N F P D E Y Y A H L - - - - - - - - - - - - - - P F V S S - - - - - - - N P S I S S
gm007220_Glyma0    A R A Y D A A A F H F R G H K A I L N F P N E Y G N V T P N P N N N Y S S T S L P L P L L S S - - - - - - - - - - S S S
gm026695_Glyma1    A R A Y D A A A F H F R G H R A I L N F P N E Y Q S H N P N - - - - - - - S S L P M P L A V S - - - - - - - A P P S Y S
 
AT3G23230.1     S G S T S T N V - - - - - - - - - - - - - - - - - - - - S R Q N Q R E V F E F E Y L D D K V L E E L L - D S E E R K R -
gm026693_Glyma1    S N S M L K N - - - - - - - - - - - - - - - - - - - - - - - D H G K Q V I E F E C L D D K L L E D L L - D C D D Y A Y E
gm035749_Glyma1    S N S M L K S - - - - - - - - - - - - - - - - - - - - - - - D H G K Q V I E F E C L D D K L L E D L L - D C D D Y A Y E
gm035754_Glyma1    S S S F T S N Y S G D D - N N H L V R P - - - G E I M Q G G D L - D D T F E L E Y L D N K L L E E L L - Q M Q D N R H F
gm055290_Glyma2    G A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Q Q R P V F E I P C L D D K V L E D L L G Q S E E H K K K
gm002627_Glyma0    S S S S S S N A S - - - - - - - - - - - - - S A S A L A S P S S T N Q V I E F E Y F D D K L L E E L L - G Y E D K N K P
gm024138_Glyma0    N G S S F A P - - - - - - - - - - - - - - - - - - - - - - - - T H K E V I E F E C L D N K V L E D L L - E S E V K R R N
gm042339_Glyma1    N G S S Y A A - - - - - - - - - - - - - - - - - - - - - - - - Q Q K E V I E F E C L D N K V L E D L L - E S E V K R R N
gm007220_Glyma0    S S S S F P S Y Y G E G - - - - - - - - - - S S Q Q Q Q G N D - - D D T F E L E C L D N K L L E E L L - Q Q A P D R S G
gm026695_Glyma1    S S S S T S N Y S G D D N N N H L V R P A F S G E I M Q G G D H D D D T F E L E Y F D N K L L E E L L - Q M Q D N R H F
 
AT3G23230.1     - - - - - -
gm026693_Glyma1    K D L P K N
gm035749_Glyma1    K D L P K N
gm035754_Glyma1    Y K - - - -
gm055290_Glyma2    N K G D - -
gm002627_Glyma0    D K - - - -
gm024138_Glyma0    E D - - - -
gm042339_Glyma1    E D - - - -
gm007220_Glyma0    N - - - - -
gm026695_Glyma1    - - - - - -
 
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